Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00866 ATGGACGGTGTTATTGTGAGAAGAGTCATTCCTTCGGATAACAGTTGTCTCTTCAATGCAGTTGGATATGTTATGGATCATAACAAGACGAAAGCTGCCGAGTTGCGACAGATTATAGCTGCAACAGTAGCAAGTGATCCACAGAAATATAGTGAAGCATTTCTCGGGAAACCAAATGCAGAATATTGTAGCTGGATTCTTGACTCACAGAAGTGGGGAGGTGCGATTGAACTCTCAATATTAGCAGATTATTATGGACGGGAAATTGCAGCATATGATATCCAGACAACTCGATGTGATTTGTATGGTCAGGACCGTAACTATGCTGAAAGAGTGATGCTGATTTATGATGGGCTCCACTATGATGCATTAGTGATGTCTCCAATTGCGGAAGCTCCTGAAGAGTTTGATCAGACTATATTTGCTGTTCAGATGAACAGAAGCACTGGACCCGTTGAGGGGCTTGCTCTAGATTTTGTGAAGGACCAGCAGAGGAAAAGGAGTTACACCGACACTACCAACTTCACTCTGCGTTGTGGGGTATGCCAGATTGGAGTAGTTGGCGAGAAGGAGGCAATGGAGCATGCACAAGCTACTGGTCATGTTAACTTTCAAGAGTATAGATGA 627 0.437 MDGVIVRRVIPSDNSCLFNAVGYVMDHNKTKAAELRQIIAATVASDPQKYSEAFLGKPNAEYCSWILDSQKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQDRNYAERVMLIYDGLHYDALVMSPIAEAPEEFDQTIFAVQMNRSTGPVEGLALDFVKDQQRKRSYTDTTNFTLRCGVCQIGVVGEKEAMEHAQATGHVNFQEYR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00866 208 FunFam ubiquitin thioesterase OTU1 1 173 - -
Spst8g00866 208 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
Spst8g00866 208 Gene3D - 1 173 - -
Spst8g00866 208 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 6 206 - -
Spst8g00866 208 SUPERFAMILY Cysteine proteinases 7 125 IPR038765 -
Spst8g00866 208 CDD OTU_plant_OTU1_2-like 3 166 - -
Spst8g00866 208 Pfam OTU-like cysteine protease 12 98 IPR003323 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00866 1 208 C2H2 Transcription Factor Family AT1G50670 78.365 3.92e-126 352