Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst8g00846 | ATGAGTTTCTTTTCATGTTGCACGTCACAAGAGAAGATCAACAAGAACACATTGGAAAGGAGCAGTGCGGACTTCCATTATGCACAAGCTTTGCCACCATGCGCCAGCATGTGTTTTAAACCTGATAACAGAAGCAGAAAGTTCATAGAACAAGAAATCGCAAAGATCGGAAAAGGGAATATTTCCTCTCAGACTTTTTCTTATCACGATCTATGTGTTGCAACTCGAAACTTTCACCCTGGCAATATGATTGGTGAAGGAGGTTTTGGAATGGTATACAAGGGACTCATTAAAAGCATAAATCAGGTTGTTGCGGTGAAGAAACTTAACAGGAATGGATTCCAAGGAAACAGGGAATTTCTTGTAGAGGTTTTGATATTGAGTCTCTTGCACCACCCTAACCTTGTCAATTTGGTAGGGTATTGTGCAGATGGTGAGCAAAGGATTTTGGTATACGAGTACATGGTGAATGGTTCTTTAGAAGATCACCTTCTTGAACTACCTGCGGATAGAAAGCCTTTGGATTGGCATACTAGAATGAAAATTGCAGCAGGTGCAGCTAGAGGACTAGAATACTTGCATGAAGTAGCAAATCCACCAGTGATATACCGTGATTTCAAATCATCAAACATTCTATTAGATGAAAACTTCAATCCAAAGCTCTCTGATTTTGGACTTGCAAAGCTTGGTCCAACTGGTGATAAAACTCATGTATCCACGAGGGTGATGGGAACTTATGGCTATTGTGCACCCGAGTATGCATCAACAGGTCAATTGACAACAAAATCAGATATATACAGCTTCGGAGTAGTATTTCTAGAGATGATCACAGGAAGAAGAGTAATCGATCAGTCAAGACCATCTCTAGAGCAAAACTTGGTCACTTGGGCACAACCACTATTCAAAGACAGAAGGAAATCTACATTAATGGCTGATCCATTGCTAAAAGGTAACTACCCTAAAAAGGGTCTACACCAAGCACTTGCAGTTGCAGCAATGTGTCTTCAGGAGGAAGCACATACCCGACCTTTGATTAGTGACGTGGTTACAGCTCTTGATGTTTTGGCAAAGAAGCAGATACAATTGCTGGCTCCTAATCTGTTTCGTTGTGGAGGGAGCACTCGACTGGAGGTGACTGTTGCCTCAATGGAGGTGTCTGCTTTAAGGCCGCACTGTCCCTTATGCCGCCGCTGCTTCTCACTCCCCTTCCCTTGCCCTTCCCTTTTACCTTCTTCATCACTGCAACGAAGAAAAATTCAGTCATTCCAAATTTCATACAATGGCCTTCGAAATAGCTCTGTGCCTGGAAATTCTGTACAATCTAGAGCAGATTTTCCTTGCTGTCCAAAAGGGACATCAATGGGGCTTAATAAATACTATGGCGTGAGGTATGATCGTGATTTCCCCTGCAAAAGTTCAGTTTGCACTACATCTATGAAAATTGCTAATGCATCAACTGGCACACTAGAGGAGGTGATAGAGGAAGAAGAGCTGAATTTTTTGCGTTCATGTGAAACGCAAGTTAGGACTGTGGATGTGGCTCCTTGTAATAATGGATTATCCGCAACCACTGCAGGTAGAAATTTGTCTGGTGGTGATTGTAGAGGCTGGACTATAGCAAAAGATAAGTTAACTGAAAATAAAAAGGAAATGAATGGCTCAAAGAAATTTGATACGGAAAATGGCAGTTCCAATGCATCTAATGGAGTTGCTTCCTTTGGTCAGAACCGGGCTGTTTTAAAGAACGGGGATAGGAATATTATACTGCAGGATCACCGTGAATATGTCTCATCTAATGTTAAATATTCTGTAGTAAACAAATCAAAGGTGTTTACAGATTCTGAAAGGGTGGTCCGCCAGTCTAAAATGTCTTCACTGGGAATTGGTAAAGCAAAAATCACTGTAGTAAATGGTGATCATGGTATGGATGGAACTGCAAAAGATTCAACTAATGAAACATTTGCGAAACAGACACGAGATACTGACAATTCAAAGCTTCGGGATAGGCTCTGTAGTATCTATGAAGATATTCTGGTGGTTGATAATATTCCTCTTGCACAGGAAGTTTCGAAAATGCTCACAACGAAGTACAGGCATCTCATATACGCATGTGATACCGAGGTAGCCAAGATAGATGTCAAACAAGAAACTCCTGTAGATCATGGTGAGATAATATGCTTCAGCATTTATTGTGGTCCAGAAGCGGATTTTGGAGGTGGAAAGTCTTGTATCTGGGTAGATGTTCTTGATGGTGGAGGAAAAGCGATTTTAGAAAAATTTGCTGAATTTTTTAGTGACTCTTCTATCAAGAAGGTCTGGCATAATTATAGCTTTGACTCTCATGTTATAGAGAATTATGGATTCAAAGTTTCTGGATTTCATGCTGATACAATGCACATGGCCCGATTATGGGACTCTTCAAGACTTTTGGATGGGGGTTATTCTCTTGAAGGGCTTACAGGCGACAGAAGGGTCATGTCTAGGGCTCAGCTGAACCATCAAAAGGATTTGATTGGTAAGGTATCAATGAAAACTATATTTAGTAAGAAAAAAGTGAAAAAAGATGGATCTGAGGGTAAAACTAGTATCATTGCTCCTGTGGAAGAGCTACAGAGAGATGAGCGTATACCTTGGATATGTTATTCTGCCTTAGATGCTAGCAGCACTTTGAAGCTGTATGAGAGCCTAAAGGGCCATCTTTCAGACATGCCCTGGAAATTTGATGGTGTACCAGTTTATGGGAAAACCATGTATGATTTCTACAATGAATATTGGCAGCCATTTGGTGAGCTTCTAGCCAAGATGGAATCTGAGGGAATGCTAGTTGATCGGGCTTATCTTGAAAGCATAGAAAAGGTGGCCAAAGCAGAGGAAGAGGTAGCTACTAATAGATTCCGGAAATGGGCAAGTAGGTATTGTCCTGATGCCCAATATATGAATGTGGGAAGTGATTCACAGTTGCGCCAGCTGCTTTTTGGTGGCACTTTGAACAGAAAGGACTCCAGCATGGCACTTCCCACTGAACGAGTATTCAAAATTCCCAATGTTGATAATGTGATTGAAGAAGGAAAGAAGGCTCCAAAAAAATTTCGTGATATAAAGGTGACGAGCCTAGGTTATAACCTGAAGACTGAGATGTACACAGCAACTGGTTGGCCATCAGTTAGTGGTGATGCTTTAAAGGCCATGGCTGGAAATATTTCTGCTGATTATGACTTTTTTAATGACGATTGTAACTTGGATCGTGATGATGAAGATGAAAATTCTTCTCAAAGTCAAGTTGCAGCTCTAAAACTTGATACATCTGCCTATGGAACAGCCTATGCGGCTTTTCCAACAGAGGAAGAAGGGAGAGAAGCTTGCCATGCAATTGCTGCTTTATGTCAAGTTTGTTCTATCAACTCTTTGATTTCTAACTTCATCCTTCCCTTGCAGGGACATAATATATCTGGAAAAGATCTCCGTGTTCATTGTTCCTTAAATATCAACACGGAAACAGGACGCTTGTCTGCAAGAAGGCCAAATCTGCAGAATCAACCTGCTCTGGAAAAAGACCGATACAAAATCCGTCAAGCATTCATTGCTGCACCTGGGAATTCTCTTATAGTTGCTGATTATGGACAGCTGGAACTTCGGATTCTGGCACATCTTGCAGACTGTAAGAGCATGTTGGAAGCTTTTAAAGCTGGTGGAGATTTTCATTCAAGGACTGCAATGAATATGTACCCATATATTCGTGAAGCAGTTGAGAAAAAGGAAGTGCTTCTTGAGTGGCATCCTAAGCCCGGTGAAGATAAACCCCCAGTTCCTCTTTTGAAGGATGCCTTTGGTTCTGAAAGAAGAAAAGCTAAAATGCTTAACTTCTCAATTGCATACGGGAAGACACCTGTGGGGCTTTCCAAGGATTGGAAGGTTTCTGTGAAAGATGCTAAGAAAACAGTTGACCTTTGGTACAATGATAGAAAAGAGGTTTTGCAATGGCAAGAGGAGCGTAAAAAGGAAGCTCATGAGTTACATTGTGTCCACACATTGCTAGGGCGAGCACGACGGTTCCCTTTGATGGCCCAAGCTAACAAATATCAGAAAGGTCACATTGAACGAGCTGCTATTAATACTCCAGTGCAGGGTAGTGCAGCTGATGTTGCCATGTGCGCCATGTTGCAAATTTCCAAGAATAAGCGGTTGAAGGAACTTGGGTGGAAGTTACTTCTACAGGTTCATGATGAAGTCATATTGGAAGGACCAACAGAATCGGCTGAGGTTGCAAAGTCCATAGTCGTTGAGTGCATGTCCAAACCCTTTAGTGGCAGGAATATTCTTAAAGTTGACCTCTCTGTTGATGCTAAGTGTGCTCAGAACTGGAGCATGGCTCAGAGGATGGAGACCATAAAAGGTGGAGGAGGATCCGTCAAGCTTGGCACCACGGGAACAATCAGTTCCTTGATGACAAGGGAATTGGATCACGTCTCTTCTGCCCCAAATAAACAGGTATCTTCAACAAGGAGTAAAGCACAAACAATTCCTGTTTCAGTTCCCTGTGGCAGTACTACCCAAAAAAGACTACAACCAAGAAAATCATCAGTTGAAGCGAGTAGCAGTGGAAGCAGTAAAAACACAAATCGTAGAGGCCCTGGCAATGGCATGCCCCAAAAATCAAAAACTAATGGCAGAAATACACAGAGAATACCCATGCTAGGTTCTGATAAATGTTCAGTGGACAGAACTCCAGTGAGGGAGAAAAATGATAAAAAGATACCTAACATTGTTGAAGTTGTGGACATAAAATGTGGGAATGCAGAAAAGGCTTGGGCTACACCCTTAGCAAGTCGTCTTAAGAAGCTTGGTTTTTCAAAGCTCTCCGAGAGCATAATCTAA | 4875 | 0.4176 | MSFFSCCTSQEKINKNTLERSSADFHYAQALPPCASMCFKPDNRSRKFIEQEIAKIGKGNISSQTFSYHDLCVATRNFHPGNMIGEGGFGMVYKGLIKSINQVVAVKKLNRNGFQGNREFLVEVLILSLLHHPNLVNLVGYCADGEQRILVYEYMVNGSLEDHLLELPADRKPLDWHTRMKIAAGAARGLEYLHEVANPPVIYRDFKSSNILLDENFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTTKSDIYSFGVVFLEMITGRRVIDQSRPSLEQNLVTWAQPLFKDRRKSTLMADPLLKGNYPKKGLHQALAVAAMCLQEEAHTRPLISDVVTALDVLAKKQIQLLAPNLFRCGGSTRLEVTVASMEVSALRPHCPLCRRCFSLPFPCPSLLPSSSLQRRKIQSFQISYNGLRNSSVPGNSVQSRADFPCCPKGTSMGLNKYYGVRYDRDFPCKSSVCTTSMKIANASTGTLEEVIEEEELNFLRSCETQVRTVDVAPCNNGLSATTAGRNLSGGDCRGWTIAKDKLTENKKEMNGSKKFDTENGSSNASNGVASFGQNRAVLKNGDRNIILQDHREYVSSNVKYSVVNKSKVFTDSERVVRQSKMSSLGIGKAKITVVNGDHGMDGTAKDSTNETFAKQTRDTDNSKLRDRLCSIYEDILVVDNIPLAQEVSKMLTTKYRHLIYACDTEVAKIDVKQETPVDHGEIICFSIYCGPEADFGGGKSCIWVDVLDGGGKAILEKFAEFFSDSSIKKVWHNYSFDSHVIENYGFKVSGFHADTMHMARLWDSSRLLDGGYSLEGLTGDRRVMSRAQLNHQKDLIGKVSMKTIFSKKKVKKDGSEGKTSIIAPVEELQRDERIPWICYSALDASSTLKLYESLKGHLSDMPWKFDGVPVYGKTMYDFYNEYWQPFGELLAKMESEGMLVDRAYLESIEKVAKAEEEVATNRFRKWASRYCPDAQYMNVGSDSQLRQLLFGGTLNRKDSSMALPTERVFKIPNVDNVIEEGKKAPKKFRDIKVTSLGYNLKTEMYTATGWPSVSGDALKAMAGNISADYDFFNDDCNLDRDDEDENSSQSQVAALKLDTSAYGTAYAAFPTEEEGREACHAIAALCQVCSINSLISNFILPLQGHNISGKDLRVHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIAAPGNSLIVADYGQLELRILAHLADCKSMLEAFKAGGDFHSRTAMNMYPYIREAVEKKEVLLEWHPKPGEDKPPVPLLKDAFGSERRKAKMLNFSIAYGKTPVGLSKDWKVSVKDAKKTVDLWYNDRKEVLQWQEERKKEAHELHCVHTLLGRARRFPLMAQANKYQKGHIERAAINTPVQGSAADVAMCAMLQISKNKRLKELGWKLLLQVHDEVILEGPTESAEVAKSIVVECMSKPFSGRNILKVDLSVDAKCAQNWSMAQRMETIKGGGGSVKLGTTGTISSLMTRELDHVSSAPNKQVSSTRSKAQTIPVSVPCGSTTQKRLQPRKSSVEASSSGSSKNTNRRGPGNGMPQKSKTNGRNTQRIPMLGSDKCSVDRTPVREKNDKKIPNIVEVVDIKCGNAEKAWATPLASRLKKLGFSKLSESII | 1624 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst8g00846 | 1624 | CDD | DNA_pol_A_plastid_like | 1051 | 1455 | - | - | |
Spst8g00846 | 1624 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 201 | 213 | IPR008271 | GO:0004672|GO:0006468 | |
Spst8g00846 | 1624 | FunFam | DNA polymerase I | 1209 | 1378 | - | - | |
Spst8g00846 | 1624 | Gene3D | - | 1164 | 1454 | - | - | |
Spst8g00846 | 1624 | CDD | STKc_IRAK | 84 | 353 | - | - | |
Spst8g00846 | 1624 | Gene3D | Transferase(Phosphotransferase) domain 1 | 155 | 365 | - | - | |
Spst8g00846 | 1624 | Gene3D | Phosphorylase Kinase; domain 1 | 40 | 154 | - | - | |
Spst8g00846 | 1624 | Gene3D | - | 682 | 936 | IPR036397 | GO:0003676 | |
Spst8g00846 | 1624 | Pfam | Protein kinase domain | 79 | 348 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst8g00846 | 1624 | ProSiteProfiles | Protein kinase domain profile. | 78 | 355 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst8g00846 | 1624 | FunFam | DNA polymerase I | 678 | 936 | - | - | |
Spst8g00846 | 1624 | PRINTS | DNA-polymerase family A (pol I) signature | 1155 | 1177 | IPR002298 | GO:0003887|GO:0006261 | |
Spst8g00846 | 1624 | PRINTS | DNA-polymerase family A (pol I) signature | 1230 | 1243 | IPR002298 | GO:0003887|GO:0006261 | |
Spst8g00846 | 1624 | PRINTS | DNA-polymerase family A (pol I) signature | 1371 | 1387 | IPR002298 | GO:0003887|GO:0006261 | |
Spst8g00846 | 1624 | PRINTS | DNA-polymerase family A (pol I) signature | 1200 | 1223 | IPR002298 | GO:0003887|GO:0006261 | |
Spst8g00846 | 1624 | PRINTS | DNA-polymerase family A (pol I) signature | 1178 | 1193 | IPR002298 | GO:0003887|GO:0006261 | |
Spst8g00846 | 1624 | PRINTS | DNA-polymerase family A (pol I) signature | 1401 | 1414 | IPR002298 | GO:0003887|GO:0006261 | |
Spst8g00846 | 1624 | Gene3D | - | 1209 | 1378 | - | - | |
Spst8g00846 | 1624 | CDD | DNA_polA_I_Ecoli_like_exo | 696 | 934 | - | - | |
Spst8g00846 | 1624 | SMART | polaultra3 | 1188 | 1418 | IPR001098 | GO:0003677|GO:0003887|GO:0006260 | |
Spst8g00846 | 1624 | SUPERFAMILY | Ribonuclease H-like | 677 | 900 | IPR012337 | - | |
Spst8g00846 | 1624 | MobiDBLite | consensus disorder prediction | 1488 | 1565 | - | - | |
Spst8g00846 | 1624 | SMART | serkin_6 | 78 | 360 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst8g00846 | 1624 | ProSitePatterns | Protein kinases ATP-binding region signature. | 84 | 108 | IPR017441 | GO:0005524 | |
Spst8g00846 | 1624 | Pfam | 3'-5' exonuclease | 731 | 898 | IPR002562 | GO:0003676|GO:0006139|GO:0008408 | |
Spst8g00846 | 1624 | FunFam | Serine/threonine-protein kinase PBS1 | 155 | 367 | - | - | |
Spst8g00846 | 1624 | FunFam | Serine/threonine-protein kinase CDL1-like | 49 | 154 | - | - | |
Spst8g00846 | 1624 | PANTHER | DNA POLYMERASE I | 649 | 1458 | IPR002298 | GO:0003887|GO:0006261 | |
Spst8g00846 | 1624 | MobiDBLite | consensus disorder prediction | 550 | 570 | - | - | |
Spst8g00846 | 1624 | SUPERFAMILY | DNA/RNA polymerases | 917 | 1455 | IPR043502 | - | |
Spst8g00846 | 1624 | Pfam | DNA polymerase family A | 1123 | 1455 | IPR001098 | GO:0003677|GO:0003887|GO:0006260 | |
Spst8g00846 | 1624 | MobiDBLite | consensus disorder prediction | 1488 | 1579 | - | - | |
Spst8g00846 | 1624 | SUPERFAMILY | Protein kinase-like (PK-like) | 64 | 367 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst8g00846 | Spst-Chr8 | 7578535 | 7595337 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst8g00846 | 60 | 356 | Glycoside Hydrolase | AT3G07070 | 70.370 | 2.45e-144 | 448 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-1 | Spst8g00846 | DNA_pol_A | 1e-70 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst8g00846 | K02335 | - | gmx:100797016 | 1853.18 |