Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00841 ATGATTTGCACGGTCAAACAACCCTCCATATCGATCGTAGCTTCTCATGTTTTGCTACGGAAAAAGGGTTCATCTTCAACTCCAGTTCAGTCATGTTCCGTTGTTGTCCCTTCTTCCCATCTAAGGGAAAATACTCTGAGATCTTTGGTGTCAGTACAAAAGCCACTGCACCTTTCATGTGTTGGTTTGGGGAATTTTGTTGGGTGTCCGGTTAGGCGTGAGCGTGGTCATTTGGGGACATGTAGGGCGTATGAGGCTGAGAGACCGGAGGTAGAAGGGGCTGGGAATCCATCTGAGGCTGCTAAGAAGGTGAAAATTGGGATATACTTTGCAACCTGGTGGGCTCTGAATGTGGTGTTCAATATTTATAACAAGAAGGTGCTGAATGTATACCCCTACCCTTGGCTTACCTCAACTCTCTCCCTTGCATGTGGGTCTCTCTTGATGTTGATCTCTTGGGCCACCAGGATAGCTGAGCCTCCTAAGACTGATCTTGAGTTCTGGAAGACTTTGTTCCCTGTTGCTGTTGCACATACAATAGGACATGTAGCGGCAACTGTTAGCATGTCAAAAGTTGCAGTATCCTTCACCCATATCATCAAGAGTGGTGAACCTGCTTTCAGTGTTCTTGTTTCCAGATTTCTTCTGGGTGAGACCTTCCCGGTGCCAGTCTATCTGTCTTTAATTCCTATCATCGGTGGATGTGCACTTGCTGCTGTTACTGAGCTCAACTTCAACATGATTGGTTTTATGGGGGCTATGATATCGAATTTGGCATTCGTGTTCCGTAATATCTTTTCAAAGAAGGGAATGAAGGGAAAGGCTGTTAGTGGAATGAATTACTATGCATGTTTATCTATCTTGTCCCTTGCAATTCTCACACCTTTTGCGATTGCTGTGGAGGGACCACAGATGTGGGCGGCTGGATGGCAAACAGCACTCTCTCAAATTGGACCTCAATTTATACTGTGGATGGCCGCTCAGAGTATATTTTATCACCTGTATAATCAGGTGTCATACATGTCTCTGGATGAGATCTCTCCTTTGACATTTAGCATTGGAAACACCATGAAACGTATATCTGTTATAGTTTCTTCAATCATCATCTTCCACACACCAGTTCAGCCTGTTAATGCTCTCGGAGCTGCTATCGCGATCTTTGGAACCTTCTTGTATTCACAGTGCTTTGAGCCTTGGAGGATCCTTTGCAAAGGTTGTACTAGGGAGGATTCGGAGGGTAACCTCTGGGTGACAGATTGTCGGGTGATTAGGGGGACTAACTTCAAGGTGGAGGAACATGCATTGTCTAGTGAGAAAACTCTAGCCATGGAAGCGAGCTTGAACTGGTTCAGTGAGTTCCCATCTCAACTGCTTTTAACCATCGTTTCACTCCTCCCCTTCAAGGATGCAGTAAGAACTTCTGTCCTCTCAAAACAATGTCAACATGTTGGAACAAGAGAAGCCCAGAGGAAGTCTTTTCTTGACTTCATAAAGTTTTGGATTGAAAACCACAAAGGAACTGTGCTGAACAAGTTCTCTTTAAGGCTATCAATGCCTGAAAAGGTTACTGAGGTTATTGATGGATGCATAATTTTGTCACACAAAGTTTACAATTGTAGCCTCGAGTCCTTCAAATTGTATTCATGTAGCTTTCTTGAGACTGAAGTGTTTAGCTTTCATGAACTCAAAGAAGTTTCTTTGGGTTGGATGGAAGTGAAGCTCAGTGCGATCAAGGCTTTGCTTTCGAACTGTGAAAAGCTCGAGTCGAGAGTTTATGTTTCACAAAATGCTGGAGCTTGA 1800 0.4406 MICTVKQPSISIVASHVLLRKKGSSSTPVQSCSVVVPSSHLRENTLRSLVSVQKPLHLSCVGLGNFVGCPVRRERGHLGTCRAYEAERPEVEGAGNPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNVYPYPWLTSTLSLACGSLLMLISWATRIAEPPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLIPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKAVSGMNYYACLSILSLAILTPFAIAVEGPQMWAAGWQTALSQIGPQFILWMAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAIFGTFLYSQCFEPWRILCKGCTREDSEGNLWVTDCRVIRGTNFKVEEHALSSEKTLAMEASLNWFSEFPSQLLLTIVSLLPFKDAVRTSVLSKQCQHVGTREAQRKSFLDFIKFWIENHKGTVLNKFSLRLSMPEKVTEVIDGCIILSHKVYNCSLESFKLYSCSFLETEVFSFHELKEVSLGWMEVKLSAIKALLSNCEKLESRVYVSQNAGA 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00841 599 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 105 395 IPR004696 GO:0016020|GO:0022857|GO:0055085
Spst8g00841 599 PANTHER SOLUTE CARRIER FAMILY 35 105 396 - -
Spst8g00841 599 Pfam Triose-phosphate Transporter family 105 393 IPR004853 -
Spst8g00841 599 SUPERFAMILY Multidrug resistance efflux transporter EmrE 146 240 - -
Spst8g00841 599 SUPERFAMILY F-box domain 447 500 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00841 Spst-Chr8 7544694 7551679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00841 1 395 Antiporters AT5G54800 73.333 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00841 K15283 - gmx:100776233 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01160 6 10670453 10672351 Spst8g00841 8 7544694 7551679 ECH
Spst8g00841 8 7544694 7551679 Spst8g00841 8 7544694 7551679 ECH
Spst6g02228 6 30869891 30873662 Spst8g00841 8 7544694 7551679 PCT