Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00828 ATGGAAACCAAGAAGCTCCAGCCCCGTTTCTCGCTCGGCCGCCAATCATCCCTCGCGCCGGAGCGCGCTGGCGCCGGCGAAGCGTCCGAGGCACTGGACCCGACGGTTCGGTTGATGTATCTGGCCAACGAGGGAGACTTGGATGGGATTGAGGAGCTGTTAGACGCGGGGAGCGACGTCAATTTCACCGACATTGACGGGCGCACCGCGCTCCACGTCGCTGCCTGCCAGGGCCGCACCGACGTCGTTGACCTGCTGCTCCGACGAGGCGCTGAAGTCGAACCACGAGACCGCTGGGGCAGCACCGTACCTCTAGCTGATGCAATGTACTATAAAAATCACGACGTGGTGAAGCTTTTGGAGAAACACGGAGCAAAACCTCCGATGACTCCTATGCATGTAGAGAATGCTCGAGAAGTACCTGAGTATGAGATTGATCCTTCTGAACTTGATTTTACTAATAGTGTTTGCATAACAAAGGGAACCTTCCGGATTGCATTATGGCGGGGAACTCAGGTTGCTGTCAAGACACTTGGGGAGGAAGTGTTCACCGATGATGATAAAGTAAAGGCATTTCATGATGAGCTTACATTACTTGAGAAAATAAGGCATCCAAATGTAGTTCAGTTTTTGGGTGCTGTAACCCAAAGCACCCCAATGATGATTGTCACAGAATATCTACCCCAGGGGGATCTTGGTGCCTACATGAAACGGAAAGGTGCATTAAAACCAGTAACAGCTGTAAAGTTTGCACTTGATATTGCTAGGGGCATGAACTATTTGCACGAACATAAACCAGAAGCCATTATACATCGAGATCTTGAGCCTTCAAATATTCTGCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGAGTTAGCAAGTTGCTTAAGGTTGCTAAAACAGTCAAAGAAGACAAACCCGTGACAAGCCTTGATACATCATGGCGATATGTTGCACCAGAGGTCTATAGAAATGAGGAATACGACACAAAAGTGGATGTGTTTTCTTTTGCTCTGATATTGCAGGAGATGATTGAAGGTTGGCCACCGTTTTATGCAAAACCAGAAAATGAAGTTCCTAAAGCATATGTTGAAAATGAGCGTCCACCATTTAGAGCATTGCCAAAGCTTTATGCTTATGGACTAAAACAGTTAATTGAGGAATGCTGGGATGAAAAACCACAAAGAAGACCAACATTTAGGCAGATAATTGGGAGATTGGAAAACATCAACTACCATCTTGTTCAAAAGAGGCGGTGGAAGACTGGAGCTCCTGGATGCATCCAGCACCTAGAGGCCTTATTTAGGGGTAATCGCACAAGTCCAAGTAGCCGAGCCATTGTGAGAATGTTAAACATGGTTAATAGTATTGAAGGGAATGTACCAAAGAATTACTGTTTGCGCAAGAAAAAGAAGGGGAGAGTGAAAGAAGAGATAGATGTGTACGGTGAAAAGGAGGGAAAGAAAAGAGAACCTTATTTCCAGATCCAGAAAGCTGGCTATGTTCTTTCCAATATATTGGTGTTGTTCAAGAATGTACTAATTAAAGTTTATTTATTTGATCCTCGGGCTCGGGTGTGGTTGTGGTTGTGGGGGGGTTCAGTTCTCTTGGAGGGTGCTTGGACTGTAGATTCTGTTTCACCAACCTTCAACCTTCAAGGCTGTGATGTGAGCATTACTCTCCTCCAACTTCTTCACCAGCCACGATCAGGAAACAAACAGGAAATAATTTTGACAAAAACATACCTTTGA 1758 0.4585 METKKLQPRFSLGRQSSLAPERAGAGEASEALDPTVRLMYLANEGDLDGIEELLDAGSDVNFTDIDGRTALHVAACQGRTDVVDLLLRRGAEVEPRDRWGSTVPLADAMYYKNHDVVKLLEKHGAKPPMTPMHVENAREVPEYEIDPSELDFTNSVCITKGTFRIALWRGTQVAVKTLGEEVFTDDDKVKAFHDELTLLEKIRHPNVVQFLGAVTQSTPMMIVTEYLPQGDLGAYMKRKGALKPVTAVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKVAKTVKEDKPVTSLDTSWRYVAPEVYRNEEYDTKVDVFSFALILQEMIEGWPPFYAKPENEVPKAYVENERPPFRALPKLYAYGLKQLIEECWDEKPQRRPTFRQIIGRLENINYHLVQKRRWKTGAPGCIQHLEALFRGNRTSPSSRAIVRMLNMVNSIEGNVPKNYCLRKKKKGRVKEEIDVYGEKEGKKREPYFQIQKAGYVLSNILVLFKNVLIKVYLFDPRARVWLWLWGGSVLLEGAWTVDSVSPTFNLQGCDVSITLLQLLHQPRSGNKQEIILTKTYL 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00828 585 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 121 417 - -
Spst8g00828 585 ProSiteProfiles Ankyrin repeat profile. 66 98 IPR002110 GO:0005515
Spst8g00828 585 Gene3D - 5 143 IPR036770 -
Spst8g00828 585 ProSiteProfiles Protein kinase domain profile. 117 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00828 585 CDD STKc_MAP3K-like 166 409 - -
Spst8g00828 585 SUPERFAMILY Ankyrin repeat 37 133 IPR036770 -
Spst8g00828 585 SMART ANK_2a 100 129 IPR002110 GO:0005515
Spst8g00828 585 SMART ANK_2a 66 95 IPR002110 GO:0005515
Spst8g00828 585 SMART ANK_2a 32 62 IPR002110 GO:0005515
Spst8g00828 585 Pfam Protein tyrosine and serine/threonine kinase 169 408 IPR001245 GO:0004672|GO:0006468
Spst8g00828 585 SUPERFAMILY Protein kinase-like (PK-like) 158 413 IPR011009 -
Spst8g00828 585 MobiDBLite consensus disorder prediction 1 29 - -
Spst8g00828 585 FunFam Integrin-linked protein kinase family 17 143 - -
Spst8g00828 585 Pfam Ankyrin repeats (3 copies) 38 127 IPR002110 GO:0005515
Spst8g00828 585 Gene3D Transferase(Phosphotransferase) domain 1 229 426 - -
Spst8g00828 585 FunFam serine/threonine-protein kinase STY46-like 145 228 - -
Spst8g00828 585 Gene3D Phosphorylase Kinase; domain 1 145 227 - -
Spst8g00828 585 FunFam Os01g0748600 protein 138 429 - -
Spst8g00828 585 ProSiteProfiles Ankyrin repeat region circular profile. 66 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00828 Spst-Chr8 7461993 7477063 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00828 1 424 MAP Kinase Kinase Kinase AT4G18950 66.513 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Spst8g00828 PK_Tyr_Ser-Thr 3.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00828 - - gmx:100795964 836.254