Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00824 ATGTTCGGTGGATTAAGGAACAGCTTCTCTGGATCATTGTCATCACATGAGATGACATCCACCAGTTTCTTATCCCAGATGCATGGAATGGTTAGATCCATGACTAATGGAAGAATGTATGACACTTTAGCAGCAGCAACGGACGTTCATACAGATGAGGACAGTTCTGAAGGTGGTGATGTGCATTCAAGCTTTGAAAGGGAAAAAGGAGCAAGGTTGGGTGACACAATAATAGCATCAGTGAAGGAAGCACATCCCAATGGAAAAGAGAAGAAAGGAAAGGTAGTGCATGGTGTGGTTGTGCGTGCAGCCATGCAAAAGGGAAGATGTGACGGTAGTGAGGTGAAGTTCGATGACAATGCTGTGGTGCTTGTGGACAAGCAAGGGCAACCCATTGGAACTAGAGTTTTTGGGCCAGTGCCCCATGAGCTCAGGCAGAAGAAGCATGTCAAGATTCTTACCTTGGCAGGACATATTGCTTGA 483 0.4596 MFGGLRNSFSGSLSSHEMTSTSFLSQMHGMVRSMTNGRMYDTLAAATDVHTDEDSSEGGDVHSSFEREKGARLGDTIIASVKEAHPNGKEKKGKVVHGVVVRAAMQKGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00824 160 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 66 159 IPR000218 GO:0003735|GO:0005840|GO:0006412
Spst8g00824 160 Pfam Ribosomal protein L14p/L23e 66 159 IPR000218 GO:0003735|GO:0005840|GO:0006412
Spst8g00824 160 Gene3D Ribosomal protein L14 44 159 IPR036853 GO:0003735|GO:0005840|GO:0006412
Spst8g00824 160 MobiDBLite consensus disorder prediction 49 68 - -
Spst8g00824 160 Hamap 50S ribosomal protein L14 [rplN]. 30 160 IPR000218 GO:0003735|GO:0005840|GO:0006412
Spst8g00824 160 ProSitePatterns Ribosomal protein L14 signature. 98 124 IPR019972 -
Spst8g00824 160 SUPERFAMILY Ribosomal protein L14 62 159 IPR036853 GO:0003735|GO:0005840|GO:0006412
Spst8g00824 160 SMART Ribosomal_L14_2 30 160 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00824 Spst-Chr8 7441116 7441999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00824 61 144 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 32.143 9.92e-08 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00824 K02874 - fve:101291289 181.415