Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00808 ATGGAGATTCAGTTGAAAGAAGCTGTGATTGTTACAGATACTAGCTTGCAATCATTATTCCCCACTGCTCAACTGCAATCTGAATGCACCATGCAGGAGCCCCTCTTGAACCATTGCTCCGGAAAAGAAGAAGCAGACACACCAAGCAGACCATTGCCCGAGGAACTATCAGTCCATGATCTTGGTCTTGCCCCATCTCAATTCCAGTGTAGTTCTCCTCGTATCACTAATGAAGCTAAGAATTCTTTCAACCTCATAGCCAACTTGGTCTACATGAAAGGAAGGATTATCCAACGTTCTCGTTCTGCACCGTCTTTATTATTTGCTGACACCGGGGTAGATTTTCAAGAGCCCTCTGAACCGCATAAGTCATCAACGTTAATAGTTAGACTATCTTTTATTGGTGTTTTCTTGTATGTGGCAACTGGGGTAGCAGTGTACATGATTAGTGGGAGTTTCAGGGGCAGTACCACTTTCAAGCCTTTAGATGCTGTGTACTTTACTATGGTAACTCTCTGCACAATTGGGTATGGAGATATCGTTCCTGACTCCACTTTTACTAAAATCTTTACATGTGGTTTCATTTTGGTGGGTTTTGGATTTATTGGTTTTCTGCTGAATGTGTTGGTTGCTTACATTTGCGATACACAAGAGGCTTTCTTGTTGAGCATGATGGATGAGAATAGATATAAGAAAATTCTCAGGACGTATATGGTTGATGCAGAGAAAGGAAGAATGAGGATAAGAACCAAAGTTTGTCTGGCCTTGGTAGTTGTCATTGGGTGCATAGCTATAGGAACAGTCACATTGCACTTTGTTGAGGACCTGAATTGGGATGACAGTATTTATCTCTCCATCACTTCTGTTACAACGGTTGGTTATGGGGATTTTTCTATCAGAACAGTAGCAGGAAGATGCTTTGCAATTATATGGCTTTTGGTAAGCACATTGGCAGTTGCCAGGGCCTTTATATACCTCACTGAATATAGTATTCACAAGAAAAATCGTAACATGGCAAAAAGGGTTCTTCAGAAGAAGATAACCTTGTCAGATTTAGCGGCTGCAGACCTTGATAATGATGGATCAATCAGCAAGTCTGAATTTGTCATATACAAGCTTAAGCAAATGGGGAAGATTACAGAGTTAGACATTCTGCAAATAGGGAAACAATTTGATTCCTTGGAACATGGCATGTTTGGCAAGATTACTCTTGCTGACCTCATGGAAACTGTCTAA 1236 0.4094 MEIQLKEAVIVTDTSLQSLFPTAQLQSECTMQEPLLNHCSGKEEADTPSRPLPEELSVHDLGLAPSQFQCSSPRITNEAKNSFNLIANLVYMKGRIIQRSRSAPSLLFADTGVDFQEPSEPHKSSTLIVRLSFIGVFLYVATGVAVYMISGSFRGSTTFKPLDAVYFTMVTLCTIGYGDIVPDSTFTKIFTCGFILVGFGFIGFLLNVLVAYICDTQEAFLLSMMDENRYKKILRTYMVDAEKGRMRIRTKVCLALVVVIGCIAIGTVTLHFVEDLNWDDSIYLSITSVTTVGYGDFSIRTVAGRCFAIIWLLVSTLAVARAFIYLTEYSIHKKNRNMAKRVLQKKITLSDLAAADLDNDGSISKSEFVIYKLKQMGKITELDILQIGKQFDSLEHGMFGKITLADLMETV 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00808 411 FunFam Two-pore potassium channel 2-like 127 223 - -
Spst8g00808 411 ProSitePatterns EF-hand calcium-binding domain. 356 368 IPR018247 -
Spst8g00808 411 Gene3D - 119 217 - -
Spst8g00808 411 SUPERFAMILY Voltage-gated potassium channels 122 213 - -
Spst8g00808 411 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 102 182 IPR003280 GO:0005267|GO:0016020|GO:0071805
Spst8g00808 411 FunFam Two-pore potassium channel 3 235 349 - -
Spst8g00808 411 SUPERFAMILY Voltage-gated potassium channels 225 346 - -
Spst8g00808 411 Gene3D - 218 355 - -
Spst8g00808 411 Pfam Ion channel 136 213 IPR013099 -
Spst8g00808 411 Pfam Ion channel 258 323 IPR013099 -
Spst8g00808 411 PRINTS Two pore domain K+ channel signature 170 198 IPR003280 GO:0005267|GO:0016020|GO:0071805
Spst8g00808 411 PRINTS Two pore domain K+ channel signature 290 299 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00808 Spst-Chr8 7336175 7339725 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00808 91 409 Ion Channels AT4G18160 48.297 4.95e-104 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00808 K05389 - gmx:100789639 612.068