Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst8g00806 | ATGGCGAATGAGAAGGATCGTTTTTATGACCCTTTTCATTACAACCACCATGAACAACAACTCAACCACTCTTCAAGCTTTCCATTCTTTAGGGACAACAACTCGGCACCAATTACTTCACAAAACTTTCAAGGGTTTGATCATCATCATCATAATCCTTCTCATCACCGCACCACTTTCACTGACTGCTTACACGGTTCCATGGATTACAACACCCTCTCCAGAGCCTTTGACCTGTCTTGCTCATCATCTGAAGTGATCTCCTCCATTGATGAAAACCCCAAGAAGCCTAGCGCGGGAGACTCAGCAGGGATCAGTGGGAACCAGTCAACACCAAATTCATCGGTGTCCTCATCATCCAACGAAGCGGAAGCAGTGATGGAAGAAGACTCAACCAAAAGCCACAAGAAAGATAAGCAGCCAAAAGGGTGTGAAGATGGAGAAGAAAAGCCTAAGAAAGAGAACAAGCCTAAAAAGAAAGAGAAAAAGCCAAGAGAACCTCGTTTTGCCTTCTTGACTAAAAGTGAGATCGATCACCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCAGTCAAGAATAGTCCGTACCCAAGGAGCTACTACAGATGCACCAGTCAGAAGTGCAGTGTAAAGAAAAGGGTGGAAAGATCATTCCAAGATCCATCAATTGTGATCACAACATATGAAGGGCAACACAACCATCACTGTCCAGCAACACTTAGGGGCAGTGCCGCCAGCATGTTGTCATCACCTCCCTTTTTTGGTTCCTCTTATATGGGGTCAAGCTTACCCCAAGATTTTCTTGCTCAGTTGCTTCCAAGTTATAGCCAAAATGATCACCAGAATCCAATCTTCCAACAAAACCTTTCCCATAATCTCCATCTCCAGCCGCAACAACACCAACAAGAACATCAGCATCAGCACCAGTTCCAACTCCCTCGTGACAATGGTTTGTTGCAAGACCTACTACCATCATCATTCCCCGGCAAACAAGAGCCATGA | 1011 | 0.4471 | MANEKDRFYDPFHYNHHEQQLNHSSSFPFFRDNNSAPITSQNFQGFDHHHHNPSHHRTTFTDCLHGSMDYNTLSRAFDLSCSSSEVISSIDENPKKPSAGDSAGISGNQSTPNSSVSSSSNEAEAVMEEDSTKSHKKDKQPKGCEDGEEKPKKENKPKKKEKKPREPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCSVKKRVERSFQDPSIVITTYEGQHNHHCPATLRGSAASMLSSPPFFGSSYMGSSLPQDFLAQLLPSYSQNDHQNPIFQQNLSHNLHLQPQQHQQEHQHQHQFQLPRDNGLLQDLLPSSFPGKQEP | 336 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst8g00806 | 336 | SMART | WRKY_cls | 180 | 239 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Spst8g00806 | 336 | MobiDBLite | consensus disorder prediction | 102 | 125 | - | - | |
Spst8g00806 | 336 | FunFam | WRKY transcription factor 57 | 166 | 240 | - | - | |
Spst8g00806 | 336 | Gene3D | WRKY domain | 164 | 241 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Spst8g00806 | 336 | ProSiteProfiles | WRKY domain profile. | 175 | 240 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Spst8g00806 | 336 | SUPERFAMILY | WRKY DNA-binding domain | 173 | 240 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Spst8g00806 | 336 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 36 | 302 | IPR044810 | GO:0003700 | |
Spst8g00806 | 336 | Pfam | WRKY DNA -binding domain | 181 | 237 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Spst8g00806 | 336 | MobiDBLite | consensus disorder prediction | 88 | 171 | - | - | |
Spst8g00806 | 336 | MobiDBLite | consensus disorder prediction | 126 | 171 | - | - | |
Spst8g00806 | 336 | MobiDBLite | consensus disorder prediction | 38 | 58 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst8g00806 | Spst-Chr8 | 7326581 | 7328502 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst8g00806 | 1 | 245 | WRKY Transcription Factor Family | AT4G18170 | 52.174 | 1.19e-59 | 192 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Spst8g00806 | WRKY | 8.9e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst8g00806 | - | - | gmx:100790175 | 484.952 |