Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00806 ATGGCGAATGAGAAGGATCGTTTTTATGACCCTTTTCATTACAACCACCATGAACAACAACTCAACCACTCTTCAAGCTTTCCATTCTTTAGGGACAACAACTCGGCACCAATTACTTCACAAAACTTTCAAGGGTTTGATCATCATCATCATAATCCTTCTCATCACCGCACCACTTTCACTGACTGCTTACACGGTTCCATGGATTACAACACCCTCTCCAGAGCCTTTGACCTGTCTTGCTCATCATCTGAAGTGATCTCCTCCATTGATGAAAACCCCAAGAAGCCTAGCGCGGGAGACTCAGCAGGGATCAGTGGGAACCAGTCAACACCAAATTCATCGGTGTCCTCATCATCCAACGAAGCGGAAGCAGTGATGGAAGAAGACTCAACCAAAAGCCACAAGAAAGATAAGCAGCCAAAAGGGTGTGAAGATGGAGAAGAAAAGCCTAAGAAAGAGAACAAGCCTAAAAAGAAAGAGAAAAAGCCAAGAGAACCTCGTTTTGCCTTCTTGACTAAAAGTGAGATCGATCACCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCAGTCAAGAATAGTCCGTACCCAAGGAGCTACTACAGATGCACCAGTCAGAAGTGCAGTGTAAAGAAAAGGGTGGAAAGATCATTCCAAGATCCATCAATTGTGATCACAACATATGAAGGGCAACACAACCATCACTGTCCAGCAACACTTAGGGGCAGTGCCGCCAGCATGTTGTCATCACCTCCCTTTTTTGGTTCCTCTTATATGGGGTCAAGCTTACCCCAAGATTTTCTTGCTCAGTTGCTTCCAAGTTATAGCCAAAATGATCACCAGAATCCAATCTTCCAACAAAACCTTTCCCATAATCTCCATCTCCAGCCGCAACAACACCAACAAGAACATCAGCATCAGCACCAGTTCCAACTCCCTCGTGACAATGGTTTGTTGCAAGACCTACTACCATCATCATTCCCCGGCAAACAAGAGCCATGA 1011 0.4471 MANEKDRFYDPFHYNHHEQQLNHSSSFPFFRDNNSAPITSQNFQGFDHHHHNPSHHRTTFTDCLHGSMDYNTLSRAFDLSCSSSEVISSIDENPKKPSAGDSAGISGNQSTPNSSVSSSSNEAEAVMEEDSTKSHKKDKQPKGCEDGEEKPKKENKPKKKEKKPREPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCSVKKRVERSFQDPSIVITTYEGQHNHHCPATLRGSAASMLSSPPFFGSSYMGSSLPQDFLAQLLPSYSQNDHQNPIFQQNLSHNLHLQPQQHQQEHQHQHQFQLPRDNGLLQDLLPSSFPGKQEP 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00806 336 SMART WRKY_cls 180 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst8g00806 336 MobiDBLite consensus disorder prediction 102 125 - -
Spst8g00806 336 FunFam WRKY transcription factor 57 166 240 - -
Spst8g00806 336 Gene3D WRKY domain 164 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst8g00806 336 ProSiteProfiles WRKY domain profile. 175 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst8g00806 336 SUPERFAMILY WRKY DNA-binding domain 173 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst8g00806 336 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 36 302 IPR044810 GO:0003700
Spst8g00806 336 Pfam WRKY DNA -binding domain 181 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst8g00806 336 MobiDBLite consensus disorder prediction 88 171 - -
Spst8g00806 336 MobiDBLite consensus disorder prediction 126 171 - -
Spst8g00806 336 MobiDBLite consensus disorder prediction 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00806 Spst-Chr8 7326581 7328502 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00806 1 245 WRKY Transcription Factor Family AT4G18170 52.174 1.19e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst8g00806 WRKY 8.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00806 - - gmx:100790175 484.952