Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00805 ATGTCGTCCATGAATAGGCAACCTTCGAAAAAATCAATACGTAACAATGGAGGATCAGCAGCTTCTGGTTCCCAAGGAGGAAGTAATGGCGGAGCAAGTGTTAAGTTTGCGAAAAGAACTTCAAGTGGGAGATACGTGAGTCTGTCAAAAGAGGACATTGACATGTCCTCGGACTTATCAGGGGATTATATGAACTACACTGTTCATATACCCCCCACTCCAGATAATCAACCCATGGACACATCTGTTGCAATGAAAGCTGAAGAACAGTATGTTTCTAATTCTTTATTTACCGGGGGATTCAACAGCGTAACCAGAGCGCATTTAATGGATAAGGTGATCGATTCTGAAGTAACTCATCCTCAAATGGCAGGCTCCAAAGGCTCTGCATGTTCAATTTGTGATGGCAGGGTCATGAGGGATGAGAGGGGACATGATGTCACTCCATGTGAGTGCAGGTTCAAGATTTGTAGAGATTGCTTTATAGATGCACAAAAAGAAACTGGTTTGTGTCCTGGTTGCAAGGAGCCGTATAAAGTGGGGGAATATGAGGAAGACCTCCAGGAGTATCCTACCAATGGGGCATTGCCATTACCAGCACCAAATGGTTCCAAACGTAATCAAAACATGTCAGTTATGAAGAGAAACCAAAACGGAGAATTTGACCATAACAAGTGGTTGTTCGAGTCTCAAGGTACCTACGGAGTTGGTAATGCGTATTGGCCCCAAGATGATGATGATGATGGTGAAGAGGCCTTAAAGACAGGAATGCTTGATCAGGAGAAGCCGTGGAAGCCTTTGAGCCGGATAACGCCAATTCCATCAGGCATCATTACTCCTTACAGGTTTATTATTGCTGTTCGATTAGTAGTATTGGTGTTCTTTTTACGCTGGAGAGTGATGCATCCAAATAATGATGCAATATGGTTGTGGCTTATGTCAGTCACTTGCGAGATATGGTTTGGTTTCTCATGGATTCTAGATCAAGTTCCCAAGCTTTGCCCTATTAATCGTTCCACTGATCTTGATGTCCTTCATGATAAATTTGATAGTCCATCCCCGTCAAATCCCACAGGGCGATCCGATCTACCTGGTCTGGACCTCTTTGTGTCCACTGCTGATCCTGAGAAGGAGCCACCTCTTGTCACTGCTAATACCATTCTTTCCATATTATCGGTTGATTACCCTGTTGAGAAGCTCGCATGTTACATTTCTGATGATGGAGGTGCTCTCTTGACTTTTGAAGCCATGGCTGAGGCTGCTAGCTTTGCGGATTTATGGGTTCCATTTTGTCGAAAACACAAAATTGAGCCGAGAAATCCAGATACTTACTTCAGCTTGAAAGTTGATCCCACCAAGAACAAAAGCAGAACGGATTTTGTGAAGGACAGAAGGAGGGTGAAGAGGGAGTACGACGAGTTCAAGGTACGCATAAATGGCCTTCCAGATTCCATCAGGAGAAGATCTGATGCATTTAATGCGAGAGAGGAGATGAAGATGATAAAGCATATGAAGGAGAGTGGGGCTGACCCTACTGACACTGTCAAAGTGTTGAAGGCGACATGGATGGCAGATGGCACCCACTGGCCTGGTACTTGGGCTAGTCCTTCTAGTGAACATTCTAAAGGTGATCATGCTGGAATACTTCAGGTAATGTTAAAGCCACCAAGTCCGGATCCGCTATTGGGAAGTGCAGATGACAAAATTATAGACTTCACAGAAGTAGATACGAGGCTGCCAATGTTTGTATATGTTTCTCGAGAGAAACGACCTGGTTATGATCACAACAAGAAAGCAGGTGCCATGAACGCATTAGTTCGAGCTTCTGCAATTTTGTCGAACGGACCATTCATTCTCAACCTTGACTGTGACCATTATATCTACAATTGCAAGGCAGTGAGAGAAGGTATGTGCTTCATGATGGACAGAGGTGGCGAGGACATATGCTACATCCAGTTCCCTCAGAGATTCGAAGGCATCGACCCCTCAGATCGCTACGCCAATCACAACACGGTGTTCTTCGACGGAAACATGCGAGCCCTTGATGGTGTTCAAGGTCCAGTGTACGTGGGGACCGGATGCATGTTCAGGAGGTTTGCTCTGTACGGATTCGACCCTCCTCCGGTGGACAAAGTGGAGGAAAAGAAAGAGGTTAAGAAGGGTGAAGAGTCTGAACCACCGACCGTGAATGCTAGCGAGTTTGATCCAAATCTTGACGTGAACTTATTGCCTAAGCGCTTTGGTAATTCAACCATGTTGTCTGAGAGCATTCCTGTCGCAGAGTTCCAGGGTCGTCCTTTGGCGGATCACCCTGCCATCAAGTATGGACGTCCACCTGGTGTTCTTAGGGCCCCTCGCGACCCCCTTGATGCTAGTACTGTAGCTGAAGCCGTATCTGTCATTTCTTGCTGGTATGAGGACAAGACAGAGTGGGGAGACAGAGTGGGGTGGATTTACGGGTCTGTGACAGAAGATGTGGTCACAGGCTACCGCATGCACAACCGTGGATGGCGTTCTGTGTACTGCATAACGAAGCGAGATGCATTTCGAGGATCAGCACCGATTAACCTCACTGATCGACTGCACCAGGTGCTGAGATGGGCCACGGGCTCTGTCGAAATATTCTTCTCGAAGAACAACGCCTTCCTAGCCAGTAGGCGCCTCAAGTTTCTCCAACGTCTGGCATACCTCAACGTTGGCATCTACCCCTTCACCTCCATCTTCCTCGTCGTCTATTGCTTCCTCCCCGCACTCTCTCTATTCTCAGGGTTCTTCATTGTCCAAACTCTCAGCATCGCCTTCTTAATCTACCTGCTCCTCATCACCGTATGCTTGGTGGCCTTGGCCATTCTTGAGGTTAGATGGTCTGGTGTAGAGCTAGAGCAGTGGTGGAGAAACGAACAGTTTTGGCTCATTTCTGGAACCAGTGCTCACTTGGCTGCTGTGGTGCAAGGACTCCTTAAGGTCATTGCAGGGATTGAGATTTCCTTCACCTTGACGACCAAGTCAGGATCGGACGACGAAGAGGACATATACGCCGATTTGTACCTAGTAAAGTGGAGCTCCTTGATGGTTCCGCCCATTGTGATTGCTATGATGAACATCATCGGCATTGCAGTGTCCTTTTCCAGAACCATTTACAGTGCAAACCCGCAATGGAGCAAGTTCATCGGAGGAGCATTCTTCAGTTTCTGGGTGCTTGCCCATTTGTACCCTTTTGCAAAAGGGTTGATGGGGAGGAGAGGCAAGACACCCACCATTGTGTTTGTGTGGTCTGGTCTCATTGCAATCACTCTCTCTTTGCTTTGGGTTGCCATCAACCCTCCCCAAGGTGGCGATGGACAAGGCATAGTATGGCCCCACTTGTTGCCTACTAGTATGCCACTTCATCTTTTGGAGCATCTGGATTTTGTTATAGGGAGTCTAGCTTCCTTGGATCACCACAAAGAAATTGTTGCGAGAATCAACAATCAACAGTCTGGGATTATCGTAAATCATGACAAATATGCTATTAGTGATCTGTTGAACTCTGGCTTTTTGTTTATGGCATTGTTGCAACAAACTCTAGCATTGTTCAGCTCTGAAGAACTTGTGGGGACGATATTGATTGACTTGGTGCAACCAATTATGTCATCCAACAGTTCTTTGAAAGGGGAATTGACAAAGAAGACGCCACTTTTGGGGTTGAGACGATGGGTTTTGATTGGGATAGGTGTTGGTGCATTTATAGTACTGATTCTTTGTATATTATCGATATGGGTGATGTTTCGGAGAAAGACTAGGAGATCTCTGGACAAGTATGCTACATCCCAAATACCAAATGTCTCAAAAGATATCGATGTTGACAAGGTTGGGGTGCAGAATTCTCATGTTCAACCAGAAAATGTGCTTATACCTGTTCATGACAAGACAAGTGAAAAGAATTCAGATAATGTATCAGTTCATTTGGGAAACAGCAAATCTGGTGATCCTGATAGTATCAGTCAGTGCAGCTCAATTTATCATCATGAGAGAGGATTTAGTTCAATGTCGGCTGAAGAAGGAAGCTCTGGGAATGTTAAGAAACAATATACATTGCCACATGGAGGACTGCCCACTGCCTCTCCATTAGTTGGCTTGCCTGAATTTTCTCATCTTGGGTGGGGCCACTGGTTTACACTTAGAGATCTGGAAATGGCAACCAAACGATTCTCAACTGAGAACATTATTGGTGAGGGTGGATATGGGGTTGTTTACAAGGGAAGACTAATTAATGGAATTGAGGTGGCAGTGAAGAAGCTTCTGAACAACTTGGGACAAGCTGAGAAAGAATTCAGGGTTGAAGTGGAGGCTATAGGACATGTTAGACATAAGCATCTTGTACGCCTTCTTGGATATTGTGTAGAGGGAGTTCATAGGCTGCTTGTGTATGAATATGTGAACAATGGTAACTTAGAACAGTGGTTACATGGAGACATGCAACAACATGGGACACTTACCTGGGAGGCCCGCATGAAAGTCATACTTGGCACAGCCAAAGCGCTTGCTTATCTACACGAAGCAATAGAACCAAAAGTTATTCACCGAGATATAAAGTCTAGCAACATATTGATTGATGATGAATTCAATGCAAAGGTTTCTGATTTTGGTTTGGCCAAACTTTTGGATTCAGGAGAAAGTCACATAAGCACAAGAGTAATGGGAACGTTTGGTTATGTGGCGCCAGAATATGCTAACAGTGGTTTGTTAAATGAAAAGAGTGACATTTACAGCTTTGGTGTCCTCTTGCTGGAAGCAGTTACTGGAAGGGACCCTGTAGACTATGCACGTCCTGCCAACGAGGTTAATCTAGTTGAATGGCTCAAAATGATGGTAGGGACAAGGAGGGCTGAAGAAGTAGTGGACTCAAGCCTTGAAGTTAAACCACCGTTACGTGCTTTGAAGCGCACTCTTTTGGTTGCACTTAGGTGTATTGATCCTGATGCTGACAAGAGACCCAAAATGAGTCAAGTTGTGAGGATGCTTGAAGCTGACGAATATCCATATCGAGAGGATAGAAGAAATAGAAAGAGTGGCACTGTCAGCATGGAAATTGAAACTACGAAGGAATTGTCTGGACCATCTGATGCTGAAAAGATGGGGCATGCTGAAACAACTCAAGGATAG 5145 0.4533 MSSMNRQPSKKSIRNNGGSAASGSQGGSNGGASVKFAKRTSSGRYVSLSKEDIDMSSDLSGDYMNYTVHIPPTPDNQPMDTSVAMKAEEQYVSNSLFTGGFNSVTRAHLMDKVIDSEVTHPQMAGSKGSACSICDGRVMRDERGHDVTPCECRFKICRDCFIDAQKETGLCPGCKEPYKVGEYEEDLQEYPTNGALPLPAPNGSKRNQNMSVMKRNQNGEFDHNKWLFESQGTYGVGNAYWPQDDDDDGEEALKTGMLDQEKPWKPLSRITPIPSGIITPYRFIIAVRLVVLVFFLRWRVMHPNNDAIWLWLMSVTCEIWFGFSWILDQVPKLCPINRSTDLDVLHDKFDSPSPSNPTGRSDLPGLDLFVSTADPEKEPPLVTANTILSILSVDYPVEKLACYISDDGGALLTFEAMAEAASFADLWVPFCRKHKIEPRNPDTYFSLKVDPTKNKSRTDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAFNAREEMKMIKHMKESGADPTDTVKVLKATWMADGTHWPGTWASPSSEHSKGDHAGILQVMLKPPSPDPLLGSADDKIIDFTEVDTRLPMFVYVSREKRPGYDHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAVREGMCFMMDRGGEDICYIQFPQRFEGIDPSDRYANHNTVFFDGNMRALDGVQGPVYVGTGCMFRRFALYGFDPPPVDKVEEKKEVKKGEESEPPTVNASEFDPNLDVNLLPKRFGNSTMLSESIPVAEFQGRPLADHPAIKYGRPPGVLRAPRDPLDASTVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSKNNAFLASRRLKFLQRLAYLNVGIYPFTSIFLVVYCFLPALSLFSGFFIVQTLSIAFLIYLLLITVCLVALAILEVRWSGVELEQWWRNEQFWLISGTSAHLAAVVQGLLKVIAGIEISFTLTTKSGSDDEEDIYADLYLVKWSSLMVPPIVIAMMNIIGIAVSFSRTIYSANPQWSKFIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLIAITLSLLWVAINPPQGGDGQGIVWPHLLPTSMPLHLLEHLDFVIGSLASLDHHKEIVARINNQQSGIIVNHDKYAISDLLNSGFLFMALLQQTLALFSSEELVGTILIDLVQPIMSSNSSLKGELTKKTPLLGLRRWVLIGIGVGAFIVLILCILSIWVMFRRKTRRSLDKYATSQIPNVSKDIDVDKVGVQNSHVQPENVLIPVHDKTSEKNSDNVSVHLGNSKSGDPDSISQCSSIYHHERGFSSMSAEEGSSGNVKKQYTLPHGGLPTASPLVGLPEFSHLGWGHWFTLRDLEMATKRFSTENIIGEGGYGVVYKGRLINGIEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKHLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGDMQQHGTLTWEARMKVILGTAKALAYLHEAIEPKVIHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHISTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKMMVGTRRAEEVVDSSLEVKPPLRALKRTLLVALRCIDPDADKRPKMSQVVRMLEADEYPYREDRRNRKSGTVSMEIETTKELSGPSDAEKMGHAETTQG 1714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00805 1714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1519 1531 IPR008271 GO:0004672|GO:0006468
Spst8g00805 1714 Pfam Protein kinase domain 1398 1666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00805 1714 FunFam Putative receptor-like serine/threonine-protein kinase 1473 1683 - -
Spst8g00805 1714 SMART serkin_6 1397 1668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00805 1714 FunFam Putative receptor-like protein kinase 1379 1472 - -
Spst8g00805 1714 SUPERFAMILY Protein kinase-like (PK-like) 1381 1671 IPR011009 -
Spst8g00805 1714 FunFam Cellulose synthase-like protein D3 114 193 - -
Spst8g00805 1714 Gene3D Phosphorylase Kinase; domain 1 1380 1472 - -
Spst8g00805 1714 Gene3D Transferase(Phosphotransferase) domain 1 1473 1685 - -
Spst8g00805 1714 ProSiteProfiles Protein kinase domain profile. 1397 1676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00805 1714 CDD STKc_IRAK 1403 1669 - -
Spst8g00805 1714 MobiDBLite consensus disorder prediction 1676 1714 - -
Spst8g00805 1714 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 563 711 IPR029044 -
Spst8g00805 1714 Pfam RING/Ubox like zinc-binding domain 131 179 - -
Spst8g00805 1714 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 114 194 IPR013083 -
Spst8g00805 1714 MobiDBLite consensus disorder prediction 1310 1328 - -
Spst8g00805 1714 Coils Coil 1417 1437 - -
Spst8g00805 1714 SUPERFAMILY RING/U-box 120 183 - -
Spst8g00805 1714 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 265 1092 - -
Spst8g00805 1714 SUPERFAMILY Nucleotide-diphospho-sugar transferases 381 917 IPR029044 -
Spst8g00805 1714 MobiDBLite consensus disorder prediction 1299 1328 - -
Spst8g00805 1714 Pfam Cellulose synthase 716 1109 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst8g00805 1714 ProSitePatterns Protein kinases ATP-binding region signature. 1403 1426 IPR017441 GO:0005524
Spst8g00805 1714 MobiDBLite consensus disorder prediction 713 735 - -
Spst8g00805 1714 FunFam Cellulose synthase-like protein D4 567 712 - -
Spst8g00805 1714 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00805 Spst-Chr8 7310564 7320282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00805 1 1108 Glycosyltransferase AT4G38190 81.076 0.0 1918
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Spst8g00805 Cellulose_synt 2.4e-190 CL0110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00805 K20924 - gmx:100807607 2052.33