Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00794 ATGGGAAAGAATGAGTTTCTCACTCCTAAAGCAATTGCCAATCGAATCAAAGCAAAAGGATTGCAGAAGCTTCGGTGGTATTGCCAGATGTGCCAGAAGCAGTGCCGAGATGAGAATGGATTTAAATGCCATTGCATGAGTGAAGGACACCAGCGTCAAATGCAGATTTTCGGACAAAATCCACACCGAATAGTGGAGGGGTATTCTGAAGAGTTTGAGAGCTCTTTTCTAGAGCATATGAAGCGTAGTCACAGATTCAGCCGTGTGGCAGCCACAGTAGTTTATAACGAATACATAAATGATCGACACCATGTTCATATGAACTCTACTGAGTGGGCTACACTAACTGAATTTGTCAAGTACTTGGGTCGAACTGGTAAATGTAAGGTTGAGGAAACACCCAAGGGATGGTTCATTACATACATAGACAGAGACTCAGAAACCCTCTTTAAGGAGAAGATGAAAAATAAGAGAATCAAGTCAGATATGGCAGATGAAGAAAAACAGGAGAAGGAGATCAGGAAACAGATTGAAATGGCTGAGCAAATGATGCAGCTTCCTATCCCTGCTTCTGATCTTGATCTGCCTTCACAATCTCAGCCTCCGAGGGAACTAAATATGGAAGATGGAATTAAGATTGAGTTTTCTTTTGGGTCATCATTGGCTAAACAACTTGCGACCAAAGAAAAACATGAGAAAAGGGTGGTATTTGAAGAGGCTAATGAAGAAAAATATGGGCAAAGAAATTCTGGAAACAATTTGAAGAGGAAAGAAAGCAGTAGTGGAAAATCAACTTTGGAGGAAATGATGTGGGATGAAGAGAAGAAGAAGGAAAAAATCAACCGGAAGGATTACTGGTTGCACGAGGGAATCGTTGTGAAGGTTATGAGCAGAGTGTTGGCTGAGAAGGGTTACTACAAGCAAAAGGGTGTTGTACGGAAGGTGATTGACAAGTATGTTGGGGAATTAGAAATGCTTGAAAGTAAGCATGTGCTCAGAGTTGATCAGACAGAGCTTGAAACTGTCATTCCACAAGTTGGGGGCCGTGTAAAAATTGTTAATGGTGCATATCGAGGATCAATTGCTAAGTTGTTGGGGGTGGATACAGATCATTTTTGTGCTAAAGTGCAGATCGAGAAAGGACCGTATGATGGCAGAGTACTTAAAGCCATGGAATATGAGGACATATGTAAAGTCGCTTAG 1203 0.4148 MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSEGHQRQMQIFGQNPHRIVEGYSEEFESSFLEHMKRSHRFSRVAATVVYNEYINDRHHVHMNSTEWATLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKEKMKNKRIKSDMADEEKQEKEIRKQIEMAEQMMQLPIPASDLDLPSQSQPPRELNMEDGIKIEFSFGSSLAKQLATKEKHEKRVVFEEANEEKYGQRNSGNNLKRKESSSGKSTLEEMMWDEEKKKEKINRKDYWLHEGIVVKVMSRVLAEKGYYKQKGVVRKVIDKYVGELEMLESKHVLRVDQTELETVIPQVGGRVKIVNGAYRGSIAKLLGVDTDHFCAKVQIEKGPYDGRVLKAMEYEDICKVA 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00794 400 Gene3D - 60 160 IPR038254 -
Spst8g00794 400 Gene3D - 344 400 IPR014722 -
Spst8g00794 400 Coils Coil 156 183 - -
Spst8g00794 400 Gene3D - 290 343 - -
Spst8g00794 400 FunFam DNA/RNA-binding protein KIN17, putative 344 400 - -
Spst8g00794 400 SMART Kin17_mid_2 52 178 IPR019447 -
Spst8g00794 400 FunFam DNA/RNA-binding protein kin17-like 290 343 - -
Spst8g00794 400 CDD KOW_KIN17 346 399 IPR041995 -
Spst8g00794 400 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 400 IPR037321 -
Spst8g00794 400 Pfam KN17 SH3-like C-terminal domain 282 335 IPR041330 -
Spst8g00794 400 FunFam DNA/RNA-binding protein KIN17, putative 61 160 - -
Spst8g00794 400 MobiDBLite consensus disorder prediction 243 269 - -
Spst8g00794 400 Pfam Domain of Kin17 curved DNA-binding protein 52 177 IPR019447 -
Spst8g00794 400 SUPERFAMILY beta-beta-alpha zinc fingers 26 66 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00794 Spst-Chr8 7232173 7233375 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00794 1 400 C2H2 Transcription Factor Family AT1G55460 67.961 0.0 567