Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00782 ATGGGAAGAAATGAGATAGAGTCCCACGGGTTGACCTATGATGTTTTCATCAGTTTTAGGGGGGAAGATACAAGGCACAAATTTATAGGACATCTTCGTAAGGAGTTGTTCAGGAGGGGGATAAACGCTTTCCTTGATGATAAGCACCTGGAGTTAGGTCTAGAACTTTTACCTGCTCTATCCAAGGCCATTCAAGAATCTAGGATTTTCATCCTGGTCTTTTCTCCCAACTATGCTTCTTCCACGTGGTGCCTCGATGAACTTCGTAGGATCCTACAACTCTCCAAAACCAGGGGCAACAAAAACCTTGTCTTCCCAATATTTTACCATGTGGATCCCTTAGATGTGCAGCATCAGAGAAATAGTTACAAGGAGCACATGATGGAACACGAGCAAAGGTTTGGGACAGAGTCCCAGAAAGTTCGGGATTGGAGATCAGCATTGTCTGAAGTATGCAACTTGGTACGAGACCCAAAAATAGAAGAAGGGTCTGAAATCGATTTGATTGAAAATATTGTTAAGAAAGTCTATGAAAATATAACTCTGGAACCTTTAGATATTGGTCGCAAAACGGTTGGACTTGGGCCCCGCATAGAAGAGTTGAAGTCACTTCTAGACATGAACCTTGATGATAATTCTGTACGCATGTTGGGCGTTCATGGATTTGGTGGAGTTGGAAAAACAGAACTTGCAAAAGCATTGTATGACGAGATTGTGCAAAACTTTGATGCTGCTTGTTTTTTAGCTGATGTTAGAGAGAAATCAAACAAAATCAATGGCTTAGAAGATCTACAAAAGACACTTTTATCAGAGTTATATCCTAAAACAGACTTTGAAGATGTGTCCTCGCGTGCTGTAGGTGTTGCCAAGCGTCTTCCACTGGCTTTAAAAGTAATAGGTTCTGATTTGGCCACTCTTCGCGATAAAAGTCTATATGCTTGGGAACGTGCATTGGAAGAATACGAGAAGATTCATCCAAATGAAATGATTCAAGAAGTGCTCAAGACAAGCTATGATAGACTACATGACAATTCCAAACAGGTGTTCCTGGACATAGCTTGTTTCTTCAAAGGGGAGAAAAAAGAATATGTTAAAAGGATACTTGAGGAATTTGGTTCGACATCCAGTATTAATGTATTGTGTGATAAATCTCTCCTAACTATTGAGGATGATTGCTTGAAGATGCATGATCTAATACAGGATATGGGTAGAGAAATTGTAAGGCAGGAGGCACCAAATTATCCTGGTAAACGTAGCAGATTGTGGGATTGTGAAGATGTTAGAGAAATTCTAACTGAAGATTCTGGGAGTAAAAAGATTCAAGGAATAATGTTTGATCCTCCCCAACGAGAAGAAGTAAATTGGAGCGGTAATGCCTTTGAGAAAATGAAATGGCTTCGAATTCTCATTATCCGAAACACAACCTTTTCACCAAAGCCTGAGCATTTGCCAAATCATTTGAGAGTGCTTGACTGGGAAGAGTACCCTTCAAAATCTTTCCAGTCGAGATTTCATCCAAAGAAAATCATTGTTTTCAATATGCCTAGAAGCCATCTAACATTGGAAGGGCCATTTAAGAATTTTTCATGCCTGACTAACATGGATTTCTCTGATAACCAATCTATTACTGAATTGCCTGATGTGTCGCAAGTTCAAAATTTAAGAGAACTGAGACTTGATCTTTGTGGAAACCTAATTGCGATTCATTATTCTGTAGGGTTTCTCAAAAGACTTGTCCATTTAAGTGCTTCAGAATGCTCCAAACTCAGTAATTTCCCGCGAAGAATGTTTTTACCATCTCTAGAATTCCTTGACCTTAATTTATGTGGAAGTCTTGGACACTTTCCAGAGATAATGCAAGAGATGAGTAAGCCATTGAAGATTTATATGATATATACCGGAATTGAAGAACTTCCAGAATCCATCGGTAATCTTACTGGACTTGTTTATATAGACATATCAAATAGCAGGAAACTTCAATATCTACCAAGTAGCTTATTCATGTTGCCAAATGTTGTTTCCTTTAAAATTGAAGGATGTTCTCAGCTTCGAGAATTCTTCAGAAGATTCATCCATACCCTTTCAGAAGCCAATGTTTGTCCAGCATTACGAGCACTTAATTTGGGAAATTGTAACTTGGCAGATGAAGATCTAGAGATTCTTCGTTACTTTCCAAATTTAGAGGACTTGATTGCATCAGAGAATAACTTTACCTCTCTCCCAACATGCATCGACAAATGTGTTGACTTGATAAGTCTTGATTTGAGCAGATGCATAAAGCTGAAAAAAATTCCTAAATGCACTAAATTGAGAATTCTTGATGTTAACCGTTGTTACAATCTTGAGGATATTTCAGAGTTACCATCTACTATTCAAAAAGTAGATGCAAGATATTGCCACTGGTTAAGTGAAGAGACGTCAAACATGTTATGGTCTCAGGTGGCGAAAGGGATCCGGGGAATAGAAGTGATGATGCCCTTCACAACGGAGTTTCCAGAATGGTTTCACTTTGTGGAAAATGGAGCGAATCCTCATTTCTGGGCTCCTCGCAAGTTCCCCAACATTGCTCTGGGCATGGTCTTCCAAATCCAAGATGAGAGGAGGAAAAAATTTAAATTTGATCGCCATCAAGTTGTTCACCTACAGTTACATATCAACGGTCAATTTGTTCCTCGCAAAAGGTATTACAGCTTCAGAATAGAAGCAGAACATGTCTTAATCTGTGATCTACGAGTTTTGTTCAGTGACGAGGAGTGGCTTGGGCTTGATGCACTTCTAGAGCAAGAGTGGAATCTGGTCCAAGTTTTGTATCAAGCCACCTCCTCATTGTCGGTTTGTCGTTGGGGAGTTTTTGTCGACGAAGGAACCAACATGGAAGATGTCCAATTCAATTGTCCCGATCTCAAGTATTCAGAAGAGATGTCACTGCCAATAGTTCCTATGACAGATCCTATGGAGAAATATATAATGATGATAGGGAACCTAGGTCTAGGAGAGATATTTAAGAATGCGATGAATGAATATCTGGACAACGAAGAAAAGCGGGGTTTAGTACACGACAACAGTATGAATACTCTATTGGGAAGATTTAAGACTATATCAGAGGATTCTGAGGATGCATTGAATTCAAATTTGTCTGCTTTAGAAAATCCAAACTCCATCCTGAGGTTGCTCTTAGATTCAATAAAAGATGATGCTGATGATGAAAAGCCTAATGTGTTTTCCGAAGGGCTTAATGAAGTAAAGGATCCAGTTCCACTGATGAAGGAGAATGTAGGAGAAGCTTCAACCTCTGACCATCAGGGAAGTAGTTCAGAGAAGGAGCAAGACTACGATCCTCTGCTGGAAAAAATGAAGTTTGTACATTATGAAGGAATGAGGGATGGACTTCTTGAGGCAAAAAAATGCTTCCCCTCTCTAGACATTGATGAAACCTTGAATGCTGTCTTGAACAAGGGTATTAGGATTACTTTGCCACCTGAAGGGGAAAGCCAAATACCCTATGATGAAATTTGGACATACACGAGTAGGAAAGACGTTAGTGTCCCGAAGCTTCCGCAGATTGATTGGACTAATGTCATACCACCTGATCCTTTGTTCCTGGTCATGAAGCGACAGTGTCCGGAATCTCAGGCCGAAAGTAGACACTTAAAGAAAATGGAGGAACATCAAGCTCTTCGCAACAGGTTTGTTCAACTCGAGGATGAAAAGGAAAATGCTGCTTCGGATAATGGTGATTCAGAAACATGGAAGAATCGATATGATAAATTGATTCAGAAACTCAACACTCAATCTGGTGAGTTTGTTGCAAAGAAGCTTGATTGTAGCGAAGACTTAGAGTCTGCTTCAACTAGCACAGACTTGTATAGAGACAATGTCTGCAAGTGTGTGACAAGGTATGAGAAAGTGAATGTTCTTCTGAAAGGGCGAGCTGAAGAGTTGCGGAGGCTATACTATGCTGGGATTGAAGGCTACCAGAACTCTGAGGAGTTTCAAGATCTGATGAGTGCAGTATACTGGAATGGACTTGGAGATGGAGTCCTTGAAGCACAGGCCATCTCAATTGCTTTATGGAGGAAAATGCTTTAG 4089 0.3999 MGRNEIESHGLTYDVFISFRGEDTRHKFIGHLRKELFRRGINAFLDDKHLELGLELLPALSKAIQESRIFILVFSPNYASSTWCLDELRRILQLSKTRGNKNLVFPIFYHVDPLDVQHQRNSYKEHMMEHEQRFGTESQKVRDWRSALSEVCNLVRDPKIEEGSEIDLIENIVKKVYENITLEPLDIGRKTVGLGPRIEELKSLLDMNLDDNSVRMLGVHGFGGVGKTELAKALYDEIVQNFDAACFLADVREKSNKINGLEDLQKTLLSELYPKTDFEDVSSRAVGVAKRLPLALKVIGSDLATLRDKSLYAWERALEEYEKIHPNEMIQEVLKTSYDRLHDNSKQVFLDIACFFKGEKKEYVKRILEEFGSTSSINVLCDKSLLTIEDDCLKMHDLIQDMGREIVRQEAPNYPGKRSRLWDCEDVREILTEDSGSKKIQGIMFDPPQREEVNWSGNAFEKMKWLRILIIRNTTFSPKPEHLPNHLRVLDWEEYPSKSFQSRFHPKKIIVFNMPRSHLTLEGPFKNFSCLTNMDFSDNQSITELPDVSQVQNLRELRLDLCGNLIAIHYSVGFLKRLVHLSASECSKLSNFPRRMFLPSLEFLDLNLCGSLGHFPEIMQEMSKPLKIYMIYTGIEELPESIGNLTGLVYIDISNSRKLQYLPSSLFMLPNVVSFKIEGCSQLREFFRRFIHTLSEANVCPALRALNLGNCNLADEDLEILRYFPNLEDLIASENNFTSLPTCIDKCVDLISLDLSRCIKLKKIPKCTKLRILDVNRCYNLEDISELPSTIQKVDARYCHWLSEETSNMLWSQVAKGIRGIEVMMPFTTEFPEWFHFVENGANPHFWAPRKFPNIALGMVFQIQDERRKKFKFDRHQVVHLQLHINGQFVPRKRYYSFRIEAEHVLICDLRVLFSDEEWLGLDALLEQEWNLVQVLYQATSSLSVCRWGVFVDEGTNMEDVQFNCPDLKYSEEMSLPIVPMTDPMEKYIMMIGNLGLGEIFKNAMNEYLDNEEKRGLVHDNSMNTLLGRFKTISEDSEDALNSNLSALENPNSILRLLLDSIKDDADDEKPNVFSEGLNEVKDPVPLMKENVGEASTSDHQGSSSEKEQDYDPLLEKMKFVHYEGMRDGLLEAKKCFPSLDIDETLNAVLNKGIRITLPPEGESQIPYDEIWTYTSRKDVSVPKLPQIDWTNVIPPDPLFLVMKRQCPESQAESRHLKKMEEHQALRNRFVQLEDEKENAASDNGDSETWKNRYDKLIQKLNTQSGEFVAKKLDCSEDLESASTSTDLYRDNVCKCVTRYEKVNVLLKGRAEELRRLYYAGIEGYQNSEEFQDLMSAVYWNGLGDGVLEAQAISIALWRKML 1362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00782 1362 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 154 IPR035897 -
Spst8g00782 1362 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 352 IPR027417 -
Spst8g00782 1362 SMART till_3 12 154 IPR000157 GO:0007165
Spst8g00782 1362 Pfam TIR domain 13 179 IPR000157 GO:0007165
Spst8g00782 1362 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 600 782 IPR044974 GO:0006952
Spst8g00782 1362 SUPERFAMILY L domain-like 394 803 - -
Spst8g00782 1362 Gene3D Ribonuclease Inhibitor 629 814 IPR032675 -
Spst8g00782 1362 Gene3D Ribonuclease Inhibitor 423 628 IPR032675 -
Spst8g00782 1362 Gene3D - 179 296 IPR027417 -
Spst8g00782 1362 Coils Coil 1216 1243 - -
Spst8g00782 1362 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 182 - -
Spst8g00782 1362 PRINTS Disease resistance protein signature 596 612 - -
Spst8g00782 1362 PRINTS Disease resistance protein signature 216 231 - -
Spst8g00782 1362 Gene3D - 8 178 IPR035897 -
Spst8g00782 1362 ProSiteProfiles TIR domain profile. 11 180 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00782 Spst-Chr8 7127667 7132898 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00782 314 686 WRKY Transcription Factor Family AT4G12020 36.041 1.81e-55 211