Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00781 ATGGGAAGAAATGAGATAGAGTCCCACGGGTTGACCTATGATGTTTTCATCAGTTTTAGGGGGGAAGATACAAGGCACAAATTTATAGGACATCTTCGTAAGGAGTTGTTCAGGAGGGGGATAAACGCTTTCCTTGATGATAAGCACCTGGAGTTAGGTCTAGAACTTTTACCTGCTCTATCCAAGGCCATTCAAGAATCTAGGATTTTCATCCTGGTCTTTTCTCCCAACTATGCTTCTTCCACATGGTGCCTCGATGAACTTCGTAGGATCCTACAACTCTCCAAAACCAGGGGCAACAAAAACCTTGTCTTCCCAATATTTTACCATGTGGATCCCTTAGATGTGCAGCATCAGAGAAATAGTTACAAGGAGCACATGATGGAACACGAGCAAAGGTTTGGGACAGAGTCCCAGAAAGTTCGGGATTGGAGATCAGCATTGTCTGAAGTATGCAACTTGGTACGAGACCCAAAAATAGAAGAAGGGTCTGAAATCGATTTGATTGAAAATATTGTTAAGAAAGTCTATGAAAATATAACTCTGGAACCTTTAGATATTGGTCGCAAAACGGTTGGACTTGGGCCCCGCATAGAAGAGTTGAAGTCACTTATAGACATGAATCTTGATGATAATTCTGTACGCATGTTGGGCGTTCATGGATTTGGTGGAGTTGGAAAAACAGAACTTGCAAAAGCATTGTATGACGAGATTGTGCAAAACTTTGATGCTGCTTGTTTTTTAGCTGATGTTAGAGAGAAATCAAACAAAATCAATGGCTTAGAAGATCTACAAAAGACACTTTTATCAGAGTTGTTCAAGGAGACAAAAATTGAATTGGGCAGTACAAGTGAAGGAATTTATGAAATAAAACATAGGCTTCGTCGAGTGAAAGTTCTCTTGGTGTTCCTGGACATAGCTTGTTTCTTCAAAGGGGAGAAAAAAGAATATGTTAAAAGGATACTTGAGGAATTTGGTTCGACATCCAGTATTAATGTATTGTGTGATAAATCTCTCCTAACTATTGAGGATGATTGCTTGAAGATGCATGATCTAATACAGGATATGGGTAGAGAAATTGTAAGGCAGGAGGCACCAAATTATCCTGGTAAACGTAGCAGATTGTGGGATTGTGAAGATGTTAGAGAAATTCTAACTGAAGATTCTGGGAGTAAAAAGATTCAAGGAATAATGTTTGATCCTCCCCAGAGAGAAGATGTAAATTGGAGCGGTAATGCCTTTGAGAAAATGAAATGGCTTCGAATTCTCATTATTCGAAACACAACCTTTTCACCAAAGCCTGAGCATTTGCCAAATCATTTGAGAGTGCTTGACTGGGAAGAGTACCCTTCAAAATCTTTCCAGTCGAGATTTCATCCAAAGAAAATCATTGTTTTCAATATGCCTAGAAGCCATCTAACTTTGGAAGGGCCATTTAAGAAATTTTCATGCCTGACTAACATGGATTTCTCGTATAACCAATCTATTACTGAATTCCCTGACGTGTCTCAAGTTCAAAATTTAAGAGAACTGAGACTTGATCATTGTAGAAACCTGATTGCGATTCATTATTCCATTGGGTTTCTCAAAAGACTTGTTCATTTAAGTGCTTCAGAATGCTCCAAACTCAGTAATTTCCCGCGAAGAATGTTTTTACCATCTCTGGAAGTCCTTGACCTTAATTTATGTGCAAGCATTGAACACTTTCCAAAGATAATGCAAGAGATGACTAAGCCATTGAAGATTTATATGATAAATACTGGTATTCAAGAGCTTCCAGAATCCATCGGTAATCTTATTGGACTTGTTTATATAGACATATCAAATAGCAGGAAACTTCAATATCTACCAAGTAGCTTATTCATGTTGCCAAATGTTGTTTCCTTTAAAATTGAAGGATGTTCTCAGCTTCGAGAATCCTTCGGAAGTTTCATCCAAACCCTTTCAGAAGCCAACGTTTGTCCAGCAGTACGAGCTCTTAATTTGGGAAATGGTAACTTGTCAGATAAAGATCTAGAAATTCTTCGTTACTTTCCAAAATTAGAGGACTTGATTGCATCAGACAATAATTTTACATGTCTCCCAACATGCCTCGAGAAATGTGTTGACTTGATAAGTCTTGATTTGAGCCAATGCAGAAAGCTGAAAAAAATTCCTAAATGCACTAAATTGAGAATTCTTGATGTCAACCGTTGTTACGATCTTGAGGAAATTTCAGAGTTACCATCAACTATTCAAAAAGTAGATGCAAGATATTGCTACAGATTAAGTGAAGGGACATCAAACATGTTATGGTCTCAGGTGGGGAAAGGTATCCAGAGAATAGAAGTGGTGATGCCCTTCAGAACGGAGTTTCCAGAATGGTTTCACTTTGTGGGAAATGGAGGGAATCCTCATTTCGAGGCTCGTCGCAAGTTCCCTAACATTGCTCTGGCCATGGTCTTCCACTTCCAAGATGAGAGTGAAAGGGACAAATTTGCTCGCCATCGACTTGTTGACCTACAGTTACATATCAACGGTCGATTTGTTACTCGCAAAGGGTATCACAACTTCAGAATTGAAGCAGAACATGTTTTAATCTGTGATCTACGAGTTTTGTTCAGTGACAAGGAGTGGCTTGGGCTTGATGCGCTTCTAGAGCAGGAGTGGAATCTGGTGCAGGTTTCATATCAAGCCACCTCCTCCTTGAGGCTTTGTCGTTGGGGAGTTTTTGTCTACGAAGAAGGAACCAACATGGAAGATGTCCAATTCAATTGTCCCGATCCCAAGTATTCAGAAGAGATGTCACTGCCAATAGTTCCTGTGAAAGATCCTATGGAGAAATATATAATGATGATAGGGAATCTAGGTCTTGATGAATCATTTAAGAGGACGTTGAAGGAATGGCTGGACAACAAAGAAAAAGGGGGTTTTGAAGACGAGAATATGCCTATTGTATTGGGAGAACTCAAGAAGCTATCAGAGGATGCTGAGGATGCATTGAATTCTAAAGGGTCAGCTTTAGGAGATCCAAAATCCTCCCTGAGGTGGCTTTTAGATAAAATAAAAGATGATGATGGAAAGCCTAATGTGTTTTTCAAAGGGGATCTGGCATTGATTCGACTAAAGGATCCGGTGACACTGAAGAAGGATAATGTAGGGGAAGCTTCAACCTCTGGCCATCAGGGAAGTAATTCAGAGAAGGAGCAAGACTACGATCCTCTGCTGGAAAAAATAATGTTCGGATATTTCTATGATGGAATGACGGATGGACTTCTTGAGGCAAAGAATAGTTTTCCTTCTCTAGAAATTGTTGAAACCATGAATGCTGCCTTGAACAAGGGTAATAGGATTATATTGTCACCTGAAGGGGAAGAGAAAATACCCTCGGTTGAAAATAGGACATACACGAGTGGAATTTTCGGTGGACTCATGGAAGCAAAGTTGAGATTTCCTAGTTTGGACATATGGGCAACACTAAATACCGTGGCAAGTAGGAGAGACATTCATATAAATTTGGTTGTTCCACATATTGATTGGACTAATGTGATACCACCTGATCCTTTGTCCCTGGTCATGAAGCGACAGTGTTCAGAATCTGAGACCGAGAGTAGACACTTAAAGAAACTGAAGGAGGAACATGAAGCTCTTCGCATGAGGTTTGTACAACTTGAGGATGAAAAGGCAAATGCTGCTTCGGACAATGGTGATTCAGAAACATGGAAAGATCGATATGATGAATTGATTCAGAGACTCAACTCTCAATCTGATGAGTTTGTTTCAAAGAAGCTTGATTGTAGCGACGACTTAGAATCTCCTTCAACAAGCACAGAGAAGCATAGAGACAATGGCTGCAAGTGTGTGACAAAGTATGAGAAGATGAGTGGTGCTCTGAAAGGGCGAGCTGAAGAGTTGCGGAGGCTATACGATGCTGGGATCGAAGGCTTCCAGAACTCTGAGGAGTTTCAAGATCTGGTGAGTGCAGTATACATGAATGGACTTGGAGATGGAGTCCTTGAAGCACAGGCCATCTCAATTGCTCTACGTCGGAAAATGCTTTAG 4041 0.4019 MGRNEIESHGLTYDVFISFRGEDTRHKFIGHLRKELFRRGINAFLDDKHLELGLELLPALSKAIQESRIFILVFSPNYASSTWCLDELRRILQLSKTRGNKNLVFPIFYHVDPLDVQHQRNSYKEHMMEHEQRFGTESQKVRDWRSALSEVCNLVRDPKIEEGSEIDLIENIVKKVYENITLEPLDIGRKTVGLGPRIEELKSLIDMNLDDNSVRMLGVHGFGGVGKTELAKALYDEIVQNFDAACFLADVREKSNKINGLEDLQKTLLSELFKETKIELGSTSEGIYEIKHRLRRVKVLLVFLDIACFFKGEKKEYVKRILEEFGSTSSINVLCDKSLLTIEDDCLKMHDLIQDMGREIVRQEAPNYPGKRSRLWDCEDVREILTEDSGSKKIQGIMFDPPQREDVNWSGNAFEKMKWLRILIIRNTTFSPKPEHLPNHLRVLDWEEYPSKSFQSRFHPKKIIVFNMPRSHLTLEGPFKKFSCLTNMDFSYNQSITEFPDVSQVQNLRELRLDHCRNLIAIHYSIGFLKRLVHLSASECSKLSNFPRRMFLPSLEVLDLNLCASIEHFPKIMQEMTKPLKIYMINTGIQELPESIGNLIGLVYIDISNSRKLQYLPSSLFMLPNVVSFKIEGCSQLRESFGSFIQTLSEANVCPAVRALNLGNGNLSDKDLEILRYFPKLEDLIASDNNFTCLPTCLEKCVDLISLDLSQCRKLKKIPKCTKLRILDVNRCYDLEEISELPSTIQKVDARYCYRLSEGTSNMLWSQVGKGIQRIEVVMPFRTEFPEWFHFVGNGGNPHFEARRKFPNIALAMVFHFQDESERDKFARHRLVDLQLHINGRFVTRKGYHNFRIEAEHVLICDLRVLFSDKEWLGLDALLEQEWNLVQVSYQATSSLRLCRWGVFVYEEGTNMEDVQFNCPDPKYSEEMSLPIVPVKDPMEKYIMMIGNLGLDESFKRTLKEWLDNKEKGGFEDENMPIVLGELKKLSEDAEDALNSKGSALGDPKSSLRWLLDKIKDDDGKPNVFFKGDLALIRLKDPVTLKKDNVGEASTSGHQGSNSEKEQDYDPLLEKIMFGYFYDGMTDGLLEAKNSFPSLEIVETMNAALNKGNRIILSPEGEEKIPSVENRTYTSGIFGGLMEAKLRFPSLDIWATLNTVASRRDIHINLVVPHIDWTNVIPPDPLSLVMKRQCSESETESRHLKKLKEEHEALRMRFVQLEDEKANAASDNGDSETWKDRYDELIQRLNSQSDEFVSKKLDCSDDLESPSTSTEKHRDNGCKCVTKYEKMSGALKGRAEELRRLYDAGIEGFQNSEEFQDLVSAVYMNGLGDGVLEAQAISIALRRKML 1346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00781 1346 Gene3D Ribonuclease Inhibitor 583 767 IPR032675 -
Spst8g00781 1346 Gene3D Ribonuclease Inhibitor 388 582 IPR032675 -
Spst8g00781 1346 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 553 742 IPR044974 GO:0006952
Spst8g00781 1346 Coils Coil 1231 1251 - -
Spst8g00781 1346 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 182 - -
Spst8g00781 1346 Pfam TIR domain 13 179 IPR000157 GO:0007165
Spst8g00781 1346 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 307 IPR027417 -
Spst8g00781 1346 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 154 IPR035897 -
Spst8g00781 1346 SMART till_3 12 154 IPR000157 GO:0007165
Spst8g00781 1346 Coils Coil 1193 1227 - -
Spst8g00781 1346 PRINTS Disease resistance protein signature 293 307 - -
Spst8g00781 1346 PRINTS Disease resistance protein signature 550 566 - -
Spst8g00781 1346 PRINTS Disease resistance protein signature 216 231 - -
Spst8g00781 1346 Gene3D - 179 339 IPR027417 -
Spst8g00781 1346 Gene3D - 8 178 IPR035897 -
Spst8g00781 1346 SUPERFAMILY L domain-like 348 740 - -
Spst8g00781 1346 ProSiteProfiles TIR domain profile. 11 180 IPR000157 GO:0007165
Spst8g00781 1346 SUPERFAMILY "Winged helix" DNA-binding domain 302 385 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00781 Spst-Chr8 7106632 7112439 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00781 302 637 WRKY Transcription Factor Family AT4G12020 37.989 3.52e-54 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00781 - - gmx:121173506 1267.29