Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00780 ATGGAAACAATACATGATGAGGAAGAGTCCCTTGGTTTCATCTATGATGTTTTCCTCAGCTTTAGAGACGAAGATACAAGTAGTCACACATTTATAAAACATCTTTGTAAAGAGTTGCTCAGGAAGGGTATATACACTTACTTCGATGATAAGCATGTCAGGGTAACCAATCCCATTGAAGAATCTAAGATTTTAATCATTGTGTTTTCTGAGCATTATGCATCTTCCACAAGGTGTCTGGATGAACTTGTGAAGATCCTAGAATCCACCAAGAGGGACAAGAAACAAGTTGTTTTTCCAATATTTTACTTTGTGGATCCCTCAGATGTACGGCATCAGAGAAATAGTTACGGTAAGCACATGATGGCTCACCAAAATGAGTTTGGCAAAGACTCTCAGAAAGTCAAGGATTGGAGGTCAGCTTTGGCTACAGCCTGTAACTTACCAGGAGAGGCTATATACACCGCAGGCAGAGGGTATGAAATCAATTTTATTGAAAAGATTGTTATGAGGGTGTATAAAAATATAACTCCTAAGCCTTTACATACTGGTCTAAATCTCGTGGGACTTAGGCCCCGCGTTGAAGAGGTAAAGTCACGTCTAGACATGAAGTCTGATGATCGAACGGTACGTATGCTGGGCATATGGGGACTTGGTGGAGTCGGAAAAACAGAACTTGCCAAATCTTTGTATAACAAGATTGTGCATCACTTTGATGCTGCAAGTTTTCTTGCCCATGTTAGAGCGAAATCAAGCCAAATTAATGGCTTGAAAGATCTACAAAAGACACTTCTATTAGATATGTTAAAGGAGTTAGACAATGAATTGGACAATACAACTTGCTTCTTCAAAGGGGAGAAAATAGAATATGTTGAACAAGTTCTTGGGGAATTTGGTACGACATCCAACATTAATACACTGGTTAATAGATCTCTCCTAACTACTGAAGATGGTTACTTGAAGATGCATCCTCTAATACAAGATATGGGAAGAGAGATTGTTCGGCAAGAGGCACCAAATTATCCCGGTGAACGTAGCAGACTATGGATTTATGACGATGTTATTGAAATACTCACTGAAAATTCTGGAAGTTATAAGATTCAAGGGATAATGCTTGATCCCCCTCAACGAGAAAAAGTATGTTGGAGTGGTACCGCCTTTAAGAAAATGAAATGGCTTAGAATTCTCATTGTTCGGAACACATCTTTTTCACCTGAGCCTCAATATTTGCCAAATCATTTGAGGGTGCTTGACTGGGAAGAGTACCCTTCAAAGTCTTTCCCATCAAGTTTTCATCCGAAGAAAATCATTGTCTTCAATTGGCCAAGAAGTCATCTAATCTTGGAAGAGCCATTCAAGGTACAATGTATTCGTTAA 1377 0.3907 METIHDEEESLGFIYDVFLSFRDEDTSSHTFIKHLCKELLRKGIYTYFDDKHVRVTNPIEESKILIIVFSEHYASSTRCLDELVKILESTKRDKKQVVFPIFYFVDPSDVRHQRNSYGKHMMAHQNEFGKDSQKVKDWRSALATACNLPGEAIYTAGRGYEINFIEKIVMRVYKNITPKPLHTGLNLVGLRPRVEEVKSRLDMKSDDRTVRMLGIWGLGGVGKTELAKSLYNKIVHHFDAASFLAHVRAKSSQINGLKDLQKTLLLDMLKELDNELDNTTCFFKGEKIEYVEQVLGEFGTTSNINTLVNRSLLTTEDGYLKMHPLIQDMGREIVRQEAPNYPGERSRLWIYDDVIEILTENSGSYKIQGIMLDPPQREKVCWSGTAFKKMKWLRILIVRNTSFSPEPQYLPNHLRVLDWEEYPSKSFPSSFHPKKIIVFNWPRSHLILEEPFKVQCIR 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00780 458 Gene3D - 177 297 IPR027417 -
Spst8g00780 458 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 271 IPR027417 -
Spst8g00780 458 Gene3D - 14 176 IPR035897 -
Spst8g00780 458 SMART till_3 14 148 IPR000157 GO:0007165
Spst8g00780 458 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 273 IPR044974 GO:0006952
Spst8g00780 458 Pfam NB-ARC domain 194 285 IPR002182 GO:0043531
Spst8g00780 458 ProSiteProfiles TIR domain profile. 13 142 IPR000157 GO:0007165
Spst8g00780 458 SUPERFAMILY "Winged helix" DNA-binding domain 256 358 IPR036390 -
Spst8g00780 458 Pfam TIR domain 15 177 IPR000157 GO:0007165
Spst8g00780 458 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 150 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00780 Spst-Chr8 7099822 7105038 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00780 256 444 WRKY Transcription Factor Family AT4G12020 34.500 4.53e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00780 - - ahf:112791725 375.17