Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00738 ATGGAAGGTATTGTGTTTCCTCTTCTACTTTGGCCTTATCACCGATTTGGGTCTTCGATTTTGTGCTTCGTTTTTGTCAGATTACTTCAATTTCCATCCTTTCGCAATTGTTTGTTGGAACCGGAATATGGGTTGTTTGCACTAGGTCGTTGTAATGGTGAGTGTGGCTACAAGCTCCTCAATTTGGGTATTTGGGGGTCTAGAAAAGGTAGAGACGTTTTAGTTTGCTCAATTTATATTTTTCGTTCAAACACAACACATGTTCTGAACTTCCTACATTTCTTTTGGTCCTTAGAATCAAGTGAACTACAATCAGAAGAAAATAAAGTCTCCAATGAGAAAAATAAGAAAAGAAAGCTGAAAACACCAGCCCAACTTATGTCCTTGGAGAATTTTTATAATGGTAAGAACACTTTTTTGCATATATATATATATATTGCACTTTGTGAAGTGGTAATTTTTGAGGAATTTCTCTTTTTTTTTTTACTTTTGTTTCCAGAGCACAAATACCCCACAGAGGAAATGAAATTAGAACTTGCTGAGGAGTTAGGATTGACAGAAAAGCAAATATCTGGATGGTTTTGCCACAGAAGGTTAAAGGATAAAAGATTGATGAAAGACGAAGCTGCAGCTAATGGAAGACAAGATCGTTCAAGCGGTGTCATCCAGGACCGTGGCAGTGGACTTGGGCAAGATTCTTGTGGAAGCAGTAAACATGCTGATTACAGGTATCTAGATCCTAAGGAGGTTGAGAGCCACGGCCTCTACAATCACGAATTATCAGTTGCAGACATGACCCACAGACGAAGGAACCGTTATCCTGAAAACGTTAGTGGAGTGGATGACACATCATCTGAGAGCAGCTCTTTTTTGCAAGATAGGGTGTTTGCTCAAGGTCAGGATCCATATGACATGGAACCTTCTAGACATCTTACACCAAACGGAGCTCTTCCACCCTTAAATCCCAAAGGTGCAGTTAATGTGGGATACAAACCATCAGGATATTTGAAAGTGAAGGGTGAGATAGAACATGCTGCTATAACTGCTGTTAAGAAGCAATTAGGAAGGCATTATGAGGAAGATGGCCCACTACTTGGTATTGAATTTGATCCGCTTCCTCCTGGGGCCTTTGAATGCCAAACTGAAGATCCAGCTAATGAACCATACTGTGTTGCAAATCCTCCGCATCTGAATTCTCCAGAAATCTCTGCTGCAAAAAAGCCCAATCTCAGCTCTAGATATGATTCGTATTATACTAAATTTAATTCCCAAGATTTGCATATGGAAGGAGCTGACTTTGGCTCCTTGCATGAATCTGATTTCCAGGATAAACAAGACAAGAAAGCCCGCCAGAATATAAAACAAAGGAAACCTTTGTATGGTTATACCACTCATGTTTCTGGAAGGAACCCTTTCCCAGATTTGTATGAAGACTCTACTGGAGAAGCATCCGGTTATAACAGTGCCAAGAATCATAGAATGAGCACTAAGTATGGTTTTGAGGGAATGCGATCTGATTCTGCTTCTAACCATAGTGATCACTTGGAAGAAAAGCTTGCAGTTAAGCAGAAAGACTTGATGCTGCATGGTTATGATAACATCAATCCAAAGAAAATACAAAGGAATGGACATGTAAAATCTAAACCTTCTAGTTCAATCCGCAATTCCCGTGTTCCTATGGATACTGAAGAAAGGGGTTTATCGGCTAGGATGGCGAAGGAAGAGATGTTTAAGGTGAACCAGAAAGCCAGAAATACATACCGTGATGTAGATGGAGTAGGGATGCTCTCAAATGAAATCATGGTTGCGAAGCGAGGTAAAGTTGACATGCTTCAACAATACAATGTGAAACCATCACCTGTTGCTGAGATGGAACAAAGGAAAATTCATAGATCTGGTGCAGAGATGCCTTCTAGTTTTAGTGAGGATGAAACTGCTGAAACCAGTTCCTCACTGGATTATTAA 1965 0.401 MEGIVFPLLLWPYHRFGSSILCFVFVRLLQFPSFRNCLLEPEYGLFALGRCNGECGYKLLNLGIWGSRKGRDVLVCSIYIFRSNTTHVLNFLHFFWSLESSELQSEENKVSNEKNKKRKLKTPAQLMSLENFYNGKNTFLHIYIYIALCEVVIFEEFLFFFLLLFPEHKYPTEEMKLELAEELGLTEKQISGWFCHRRLKDKRLMKDEAAANGRQDRSSGVIQDRGSGLGQDSCGSSKHADYRYLDPKEVESHGLYNHELSVADMTHRRRNRYPENVSGVDDTSSESSSFLQDRVFAQGQDPYDMEPSRHLTPNGALPPLNPKGAVNVGYKPSGYLKVKGEIEHAAITAVKKQLGRHYEEDGPLLGIEFDPLPPGAFECQTEDPANEPYCVANPPHLNSPEISAAKKPNLSSRYDSYYTKFNSQDLHMEGADFGSLHESDFQDKQDKKARQNIKQRKPLYGYTTHVSGRNPFPDLYEDSTGEASGYNSAKNHRMSTKYGFEGMRSDSASNHSDHLEEKLAVKQKDLMLHGYDNINPKKIQRNGHVKSKPSSSIRNSRVPMDTEERGLSARMAKEEMFKVNQKARNTYRDVDGVGMLSNEIMVAKRGKVDMLQQYNVKPSPVAEMEQRKIHRSGAEMPSSFSEDETAETSSSLDY 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00738 654 ProSitePatterns Small, acid-soluble spore proteins, alpha/beta type, signature 1. 176 185 IPR018126 GO:0003690|GO:0006265
Spst8g00738 654 Gene3D - 97 204 - -
Spst8g00738 654 MobiDBLite consensus disorder prediction 534 566 - -
Spst8g00738 654 MobiDBLite consensus disorder prediction 216 234 - -
Spst8g00738 654 SUPERFAMILY Homeodomain-like 164 211 IPR009057 -
Spst8g00738 654 MobiDBLite consensus disorder prediction 638 654 - -
Spst8g00738 654 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 99 653 - -
Spst8g00738 654 MobiDBLite consensus disorder prediction 621 654 - -
Spst8g00738 654 Pfam Homeodomain 164 203 IPR001356 GO:0003677
Spst8g00738 654 CDD homeodomain 116 203 IPR001356 GO:0003677
Spst8g00738 654 ProSiteProfiles 'Homeobox' domain profile. 165 204 IPR001356 GO:0003677
Spst8g00738 654 SMART HOX_1 114 208 IPR001356 GO:0003677
Spst8g00738 654 MobiDBLite consensus disorder prediction 208 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00738 Spst-Chr8 6835185 6839738 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00738 99 653 Homeobox Transcription Factor Family AT4G03250 39.304 2.73e-83 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Spst8g00738 Homeodomain 6.5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00738 - - gmx:100803515 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00738 8 6835185 6839738 Spst8g00738 8 6835185 6839738 ECH