Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00730 ATGGAAAAGAATGTCCATGAATCCTCCTCCAGTTTTCCACCATCCCCACAATCATCACCCATCCTTGATATCCCTTCTGAGCCAAATGTTCCTAAATCCCCTGAACCAAATGAACAAATGGAACCACAACCTTCTGTGGTTGCTATAGTTAATGGTGTTGAGGGGGTTGAACCAAGCTCAAAGGAAGAGGCTAATCCAACCATGGAGTTTCCTATCCCATCCAGTGATAACCTGCAGGAAAGGGAGGACTTTCCAAAGCCCGTAATCTTGATTGTTCCTGCTGGCATGGATGTTGTGAACACCATCCTTGAGTTTGCTCGTGACCGAGATGTCAACATCTTGGTGCACCATGCTTCAGGTGTCATATCTGAGGTTCATATCAGTAACCCTTTATCCCATGCCAATGATTATACCTTTCAAGGAAACATGCACATGTTTTACCTCTCAGGTGTTTACACAAAATGCCTTTCACCTTTACCCCCAAACAACACTCCCTTTTCCTTCTTCAACATTCAATTCTCCAGGGGAGAGGCCCCTGAAGTCTATGGTGGTCTTGTTGGACACAAACTCATTGCTGCAGAAACTGTGCAAGTCACAGCTTCTCTCTTCAAGGGGCATGAATACTATGAGTACCATGAAGTGGTGTCTCCTTTCACTTATCCAGATGTTCAACCTGACATTGAAACTGATGATCTTGATGACACCACCACCACCAACAACACAGTTGATCAACCTTGTTTCCCTTGA 747 0.4471 MEKNVHESSSSFPPSPQSSPILDIPSEPNVPKSPEPNEQMEPQPSVVAIVNGVEGVEPSSKEEANPTMEFPIPSSDNLQEREDFPKPVILIVPAGMDVVNTILEFARDRDVNILVHHASGVISEVHISNPLSHANDYTFQGNMHMFYLSGVYTKCLSPLPPNNTPFSFFNIQFSRGEAPEVYGGLVGHKLIAAETVQVTASLFKGHEYYEYHEVVSPFTYPDVQPDIETDDLDDTTTTNNTVDQPCFP 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00730 248 CDD DUF296 86 203 IPR005175 -
Spst8g00730 248 MobiDBLite consensus disorder prediction 1 79 - -
Spst8g00730 248 MobiDBLite consensus disorder prediction 234 248 - -
Spst8g00730 248 MobiDBLite consensus disorder prediction 227 248 - -
Spst8g00730 248 ProSiteProfiles PPC domain profile profile. 82 224 IPR005175 -
Spst8g00730 248 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 85 212 IPR014476 GO:0003680
Spst8g00730 248 SUPERFAMILY AF0104/ALDC/Ptd012-like 86 208 - -
Spst8g00730 248 Gene3D - 86 218 - -
Spst8g00730 248 Pfam Plants and Prokaryotes Conserved (PCC) domain 86 204 IPR005175 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00730 87 210 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 31.538 6.24e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00730 - K15420 vun:114195162 253.447