Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00706 ATGTTCTCAACTGTGTCTTGTCTTCTCCTTTTCTTCTGTCTCTTAGGATCTGCTCAAGCTTACAAGAATTACACAGTTGGAGACGCTTTAGGCTGGTTTGACAACACTGAGAAGTCCAATGTCAATTACCAGAAGTGGGCTGACACTAAAGAATTCACCTTAGGAGATTTCCTTATTTTCAACACAGATACTAACCACTCTGTGGTTGAGACATACAATTTTACCACATACAAAGAATGTGATTATGATGATGCACAAGACAAAGACACAATCCAATGGTCAGCATCTGATCCATCCAACACCCAAACACGTCCTGTGACAGTGGCAGTTCCTTTGATGAAGGAGGGCATGACATACTTCTTTTCTGGTGATTATGATGGTGATCAGTGCAGGAGTGGACAACATTTCAAAATAAATGTGACCTATGGACAAGGGTTGCCCAAAAGTCTCAAAAGCCCAGAAGATGCCCCATCTCCTGCTAGTGCTGTTGCTGGAGATGATGATTCAGCACCAGATACTATTGTCCCTTCCAATTTCAACCATCCCAAAGAAGAACAAAATGAAGATGACAAAGCAAGTGACAAACAAGACTCTAGCTCTGTTTCAATCTCAAAGTATGCACAACTTCACATTGTGCTATTAGGGCCCCTTCTTTTCTTTTTTTAA 666 0.4114 MFSTVSCLLLFFCLLGSAQAYKNYTVGDALGWFDNTEKSNVNYQKWADTKEFTLGDFLIFNTDTNHSVVETYNFTTYKECDYDDAQDKDTIQWSASDPSNTQTRPVTVAVPLMKEGMTYFFSGDYDGDQCRSGQHFKINVTYGQGLPKSLKSPEDAPSPASAVAGDDDSAPDTIVPSNFNHPKEEQNEDDKASDKQDSSSVSISKYAQLHIVLLGPLLFFF 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00706 221 MobiDBLite consensus disorder prediction 182 196 - -
Spst8g00706 221 SUPERFAMILY Cupredoxins 22 140 IPR008972 -
Spst8g00706 221 CDD Phytocyanin 22 140 - -
Spst8g00706 221 PANTHER BLUE COPPER PROTEIN 21 167 IPR039391 GO:0009055
Spst8g00706 221 FunFam Early nodulin-like protein 18 21 143 - -
Spst8g00706 221 Pfam Plastocyanin-like domain 32 134 IPR003245 GO:0009055
Spst8g00706 221 Gene3D - 20 142 IPR008972 -
Spst8g00706 221 ProSiteProfiles Phytocyanin domain profile. 22 142 IPR003245 GO:0009055
Spst8g00706 221 MobiDBLite consensus disorder prediction 147 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00706 Spst-Chr8 6581356 6583195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00706 3 190 Phytocyanin Superfamily AT1G08500 60.714 2.74e-83 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00706 - - gmx:100499721 387.111