Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00705 ATGCGAGAGAAAATCCAACGGTCGAGGCTGAAGATAGAATTGACCTTCGCTGTAGAAGCAAAAGAGAAAGTTGCTACCGACACAGTGCTTGAATCCGCGGTGGCGACAACCGACGTAGGAGGCGGAGGAGAGGCGCGGAACGGTGGTCTTCAGGGGTTTCTGTCGTCGCTGTTCTCCACTCTCGGTGGTGTTTTTAGCTCGTCTTTTCAAGAAACACAGCAAAACGTTGTCATGGCTTCCAGAGCGGAACAACCCATCAATGGTGAGGTTCGTGAGAACAAGCAGAAGAATATGGGTGGTGAAGGAAGAAACAGAAGGGTTCTTCAGGATATTGGGAATCTTGTGGCCAAACAAGGCAATGGTGGTATCAATGTGTCTAAACCTGTCACAAGGAACTTTCGTGCGCAATTGTTGGCCAATGCACAAGAGAAGACCAAGAAATCAAGCACTGAAGTGGAGAATGGCGTGGTGGTAGCAAAGGCGAAGGCAGCTCAGAAGCCTAAAGAAGAACCTGAAGTAATTGTGATTAGCTCTGATGATGAATCGGAAAAGGAGATTCAATCAGTGGTTAAGGGAAAAAAGACAAGAGACAAAAATGCCAAGGCCTATAGTTCAGTCCTGTCTGCACGAAGCAAGGCTGCTTGTGGACTCCCAAGGGAATTGGTAGTGAACATTGATGCAACTGACATGGACAATGAATTGGCAGCAGCTGAGTATATTGATGATATCTATGAATTTTACAAAAATACTGAAAATGATGGCCGTGTGCATGATTACATTGATTCACAGCCAGATATTAATGCCAAGATGAGATCAATCCTTGTGGACTGGTTGATAGAAGTGCATAGAAAATTTGAGCTCATGCCAGAAACTCTCTACTTGACCCTGAACATTGTTGATCGTTTCCTGTCTGTGAAGGCTGTGCCTAGAAGGGAACTTCAGCTTGTTGGCATCAGCTCTATGCTGCTAGCCTCAAAATATGAAGAGATATGGGCACCAGAGGTCAATGACTTTGTGTGCATATCAGACAATGCTTATGTCTGTGAACAAGTGTTGTTGATGGAGAAGACAATTCTTAGGAAGCTGGAATGGTACTTAACGGTTCCTACACCCTATGTCTTCTTGGTTCGGTACATCAAAGCCTCCACTCCATCTGATAAAGAGATGGAAAATATGGTGCTTTTCCTTGCTGAACTTGGTATGATGCACTACCCTACTGTAGTCTTGCACTGCCCCTCTTTGATTGCTGCTTCTGCTGTACTTGCGGCTCGATGTACCCTTGAAAGGACCCCATTCTGGACAAGCACTTTGAAGCACTACACACGCTACTCTGAGGAGCAACTCAGGGATTGCGCCAAAATCCTAGTCAACCTTCATGCCGCTGCTCCAGAAAGTAAGCTTAGAGCAGTTTACAAGAAATTCAGTAGCTCAGATTGCTGCTCTGTTGCCCTTCGTTCTCCAGCAAAGAACTTAACCACACTGTCTTAA 1488 0.455 MREKIQRSRLKIELTFAVEAKEKVATDTVLESAVATTDVGGGGEARNGGLQGFLSSLFSTLGGVFSSSFQETQQNVVMASRAEQPINGEVRENKQKNMGGEGRNRRVLQDIGNLVAKQGNGGINVSKPVTRNFRAQLLANAQEKTKKSSTEVENGVVVAKAKAAQKPKEEPEVIVISSDDESEKEIQSVVKGKKTRDKNAKAYSSVLSARSKAACGLPRELVVNIDATDMDNELAAAEYIDDIYEFYKNTENDGRVHDYIDSQPDINAKMRSILVDWLIEVHRKFELMPETLYLTLNIVDRFLSVKAVPRRELQLVGISSMLLASKYEEIWAPEVNDFVCISDNAYVCEQVLLMEKTILRKLEWYLTVPTPYVFLVRYIKASTPSDKEMENMVLFLAELGMMHYPTVVLHCPSLIAASAVLAARCTLERTPFWTSTLKHYTRYSEEQLRDCAKILVNLHAAAPESKLRAVYKKFSSSDCCSVALRSPAKNLTTLS 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00705 495 Pfam Cyclin, C-terminal domain 369 484 IPR004367 -
Spst8g00705 495 PIRSF Cyclin_A_B_D_E 66 495 IPR046965 GO:0016538|GO:0044772
Spst8g00705 495 PANTHER CYCLINS 184 476 IPR039361 -
Spst8g00705 495 SMART Cyclin_C_2 369 488 IPR004367 -
Spst8g00705 495 CDD CYCLIN_AtCycB-like_rpt1 220 364 - -
Spst8g00705 495 Gene3D - 256 367 - -
Spst8g00705 495 SMART cyclin_7 276 360 IPR013763 -
Spst8g00705 495 SMART cyclin_7 373 457 IPR013763 -
Spst8g00705 495 Gene3D - 242 483 - -
Spst8g00705 495 ProSitePatterns Cyclins signature. 271 302 IPR006671 -
Spst8g00705 495 Pfam Cyclin, N-terminal domain 242 366 IPR006671 -
Spst8g00705 495 SUPERFAMILY Cyclin-like 370 490 IPR036915 -
Spst8g00705 495 SUPERFAMILY Cyclin-like 231 366 IPR036915 -
Spst8g00705 495 FunFam G2/mitotic-specific cyclin-1 357 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00705 Spst-Chr8 6570570 6573108 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00705 83 484 Core Cell Cycle Gene Families AT2G26760 53.846 2.26e-144 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00705 K21777 - gmx:547782 659.062