Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00693 ATGATCATTCAGCAGCTTCACGATCACCGGGTCGTCCTCGTCAATCAGGACTCGTTTTGTCGTGGACTGAGACCTGAAGAGTTGGAACATGTTCATGAATATAATTTGGATCACCCTGAGGCTTTTGACACTGAGCAGTTGTTAGAGTGCATGGGGAAACTCATTAGTGGCCAGGGCATGCATGTTCCCATTTATGACTTCAAGAAGCATCAACGTTCTTCTGATAGTTTTCGCCAGGTCAATGCATCCGATGTGATTATATTAGAGGGGATTCTTGTATTCCATGATCAGCGTGTGCGGGATCTGATGAACATGAAGATCTTTGTAGACACAGATGCTGATGTGAGGCTTGCTCGTAGAATTAGACGTGACACAGTGGAGAGGGGCAGGGATATAAACTCTGTTCTTGAACAGTATGCAAAATTTGTTAAGCCTGCATTTGATGATTTTGTTCTACCATCAAAAAAGTATGCTGATGTGATCATTCCAGGTGGAGGTGATAATCATGTTGCCATAGATTTGATTGTGCAACATATCCGTACAAAGCTTGGTCAACATGATCTATGCAAAATATATCCAAATGTCTATGTTATTCAGCCATCTGCCTTTCACCGAAAAACAAGTGGTTACTCCCACAGAAGCTGTACAAAATGCAATTTCGACCTTTGTCTCATCTGCTGTCGTGAGCTTCGCAATGGGCAGCTTGTAGGTGGTGCAGATCCAATTGAGTGGGAGTTTTTCTTTAAAGGACATGGTTACTTGCATGCTCAAGAAGAAAAGGCTCAAGAAGAAAGAATAAAGGTAGAACAGAATGCATCAAATGTTGATGCTAAGCCTGAGGTTCGTGAATGGTCAAGATCTAGGTGGCATGCAGAAAATAATGGTAGCATTGCTTGTCCAAAAGTTAATGATGAATGTAACCATGGTTTTCTTGAACTGAGAACCATATTAGGCCAAAGTTTCATCACAAATATGGTGCATAGTGCGAATAAACTAGCACATGCATACAAGCTTCAAGATGCAGTTAAGACCCCTGAAAAGATGTGTTCATGTTTGAGGCATGAGAGGAACACAGATAACAGATATACAAATACGAGAAAGGTTGCTTCTCGGGAAGATTCCAATGACAACTATTTATACTGTTCTAGGGCTGTAGATTTACAAGACAAGGATTTAAGGCATTTTCAGTGGCATTGGGAAAAGGGGGAGCTTGTGATTGGGGTTGTGGTACGTAAATAG 1239 0.4149 MIIQQLHDHRVVLVNQDSFCRGLRPEELEHVHEYNLDHPEAFDTEQLLECMGKLISGQGMHVPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQRVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPGGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNVYVIQPSAFHRKTSGYSHRSCTKCNFDLCLICCRELRNGQLVGGADPIEWEFFFKGHGYLHAQEEKAQEERIKVEQNASNVDAKPEVREWSRSRWHAENNGSIACPKVNDECNHGFLELRTILGQSFITNMVHSANKLAHAYKLQDAVKTPEKMCSCLRHERNTDNRYTNTRKVASREDSNDNYLYCSRAVDLQDKDLRHFQWHWEKGELVIGVVVRK 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00693 412 Coils Coil 258 278 - -
Spst8g00693 412 Gene3D - 1 196 IPR027417 -
Spst8g00693 412 PRINTS Uridine kinase signature 12 23 - -
Spst8g00693 412 PRINTS Uridine kinase signature 57 72 - -
Spst8g00693 412 PRINTS Uridine kinase signature 128 139 - -
Spst8g00693 412 PRINTS Uridine kinase signature 114 124 - -
Spst8g00693 412 PRINTS Uridine kinase signature 150 163 - -
Spst8g00693 412 Pfam Phosphoribulokinase / Uridine kinase family 16 170 IPR006083 GO:0005524|GO:0016301
Spst8g00693 412 CDD UMPK 1 182 IPR000764 -
Spst8g00693 412 FunFam Uridine kinase 1 185 - -
Spst8g00693 412 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 175 IPR027417 -
Spst8g00693 412 PANTHER URIDINE KINASE 3 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00693 Spst-Chr8 6399695 6401599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00693 1 201 PRT Gene Family AT5G40870 86.070 2.19e-119 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00693 K00876 - gmx:100780005 382.104