Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00658 ATGGATATGTCTTCTTCTGGGCTAAATGGAAGGGAGAATGAGGATTCCTTGCCTCCCCCACCACCTGTTATCCCATCAGATGTTGTGCCTGTCAAAGTAGAGCCTGAAAAGAAAAAGGTTTTGAGGCTCCCAATAGCCAGGCGTGGCCTTGCTTCTAAAGGGACGAAGTTGCTACTTCAAACAAATCACTTCAGAGTGAATGTTGGAAACACTGATGGTCACTTTTTTCAGTATAGTGTATCTCTTTCTTATGAAGATGGACGTCCTGTAGAGGGCAAGGGTGTAGGGAGGAAGGTGCTAGAGAAGGTGCACGAGACATATGATTCTGAATTGAACGGGAAGGATTTTGCTTATGATGGGGAAAAAACTCTTTTTACACTTGGATCTCTTGCTCGCAACCATCTTGAGTTTACTGTTGTTCTGGAGGATGTTGTTTCTACTAGCAGAAATAATGGGAATGTCAGTCCTGATGGAATTGAAGAATCAAGTGAGAGTGACAAGAAGAGGATGAGGCGCCAAAATAGAGCCAAAACGTTTAAAGTTGAGATCAGTTTTGCTTCAAAGATTCCTTTGCAGGCCATTGTCAATGCTCTCCGTGGGCAGGATTCTGATAATTATCAAGAAGCAATAAGAGTTCTTGATATTATTCTGAGGCAGCATGCTGCCAAACAAGGCTGTTTGCTTGTGCGCCAGTCATTCTTCCATAATGATCCGAAGAATTTTACTGATGTAGGAGGAGGTGTGCTTGGCTGCAGGGGATTTCATTCTAGTTTTAGAACCACACAGAGTGGCTTGTCCCTTAACATAGATGTCTCTACCACAATGATAGTTACTCCTGGACCTGTGGTGGACTTCCTGATTTCCAATCAGAATGTAAAAGATCCATTTTCTCTCGACTGGGTAAAGGCCAAGAGGACACTGAAAAACTTAAGGATTAAAGCAAGTCCATCCAATCAAGAATACAAAATAACTGGGCTCAGTGACCTTCCTTGCAAAGACCAAATGTTTACATTGAAGAAAAAGGGTGATGATGCTACTGAGGAGGTGACTGTGTTTGATTATTTTGTTAATCATCGAAGGATAGATCTTCGCTACTCAGGGGATCTCCCATGCATTAATGTTGGAAAGCCCAAGCGGCCAACATATATTCCACTTGAGCTTTGCTCTTTGGTATCCCTTCAACGTTACACTAAAGCACTATCCACACTACAAAGGTCATCATTGGTGGAGAAGTCCAGGCAGAAGCCGCTGGATAGGATGAGGGTTTTGAAAGATGCTTTGAGTAGTAGCAATTATGGTTCTGAACCTATGCTTCAAAATTGTGGTATTTCTATAAACTCTGGCTTTACTGAAGTTGAAGGTCGAGTTTTACAAGCTCCAAGGTTGAAGTTTGGAAATGGGGAGGATTTCAATCCAAGAAATGGGAGGTGGAACTTCAATCAGAAGAAATTAATTAAACCAACAAAAATTGAGAAATGGGCTGTGGTTAACTTTTCTGCACGATGTGATGTACGAGGACTTGTGAGGGATCTCCTCAAGTGCGCTCAAATGAAAGGAATTGCTATTGAACCGCCTTTTGATGTATTTGAAGAAGATTTTCACAATAAGCGATCTCCACCTCTGGTTAGAGTGGAGAAAATGCTTGAGTTTGTGCAGTCTAAACTTCCTGGCGCTCCTCAATTTCTTCTCTGTCTTCTTCCTGACAGGAAAAATTCTGATCTTTATGGTCCTTGGAAGAAGAGGAATCTAGCCGATTTCGGTGTTGTCACGCAGTGTATAGCTCCACAAAGGGTCAATGATCAATATTTAACTAATGTTTTGTTGAAGATTAACGCTAAGCTTGGTGGCCTAAATTCAATGTTAAGTGTTGAGCATGCTCCTTCCATCCCTGTTGTTTCCAGAGCTCCTACCATCATTATTGGCATGGATGTGTCTCATGGCTCCCCAGGACAAACAGATATCCCTTCAATTGCAGCGGTGGTTAGCTCTCGAGAGTGGCCCCTAATATCAAAGTACAGGGCATGTGTTCGAACCCAGTCTCCGAAGGTTGAAATGATTGACAATTTGTTTAAGAAAGTATCTGCAGAGGTGGATGATGGCATAATTAGGGAACTGTTGCTTGATTTCTATAGAAGTTCTGGGAATAGAAAGCCCGAAAATATAATCATCTTCAGGGATGGTGTTAGTGAGTCCCAGTTCAATCAAGTTTTAAACATCGAACTTGATCAAATAATTGAGGCTTGCAAGTTTTTAGATGAAAAGTGGAATCCCAAATTTTTGGTCATTGTTGCTCAAAAGAACCATCATACTAAATTCTTTCAACCCGGATCTCCTGAAAATGTTCCTCCTGGAACTGTAATTGATAACAAAATTTGCCATCCTCGGAACTACGATTTTTACATGTGTGCACATGCTGGAATGATAGGTACTAGCAGACCTACACACTATCATGTTCTATTAGATGAGATTGGTTTTTCACCCGATGATCTGCAGGAGCTTGTGCATTCCTTATCATACGTGTATCAGAGGAGCACCACGGCCATATCTGTTGTTGCTCCAATCTGTTATGCTCACTTGGCTGCCACTCAGATGGGGCAGTTTATGAAATTTGAGGAAAGATCGGAGACAGCTTCAAGTCACGGTGGTGCCGGAGCTCACCCCGTCCCTCAATTGCCTAGATTGAATGATAATGTCTCAAGTTCTATGTTCTTTTGCTGA 2718 0.4205 MDMSSSGLNGRENEDSLPPPPPVIPSDVVPVKVEPEKKKVLRLPIARRGLASKGTKLLLQTNHFRVNVGNTDGHFFQYSVSLSYEDGRPVEGKGVGRKVLEKVHETYDSELNGKDFAYDGEKTLFTLGSLARNHLEFTVVLEDVVSTSRNNGNVSPDGIEESSESDKKRMRRQNRAKTFKVEISFASKIPLQAIVNALRGQDSDNYQEAIRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFTDVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIVTPGPVVDFLISNQNVKDPFSLDWVKAKRTLKNLRIKASPSNQEYKITGLSDLPCKDQMFTLKKKGDDATEEVTVFDYFVNHRRIDLRYSGDLPCINVGKPKRPTYIPLELCSLVSLQRYTKALSTLQRSSLVEKSRQKPLDRMRVLKDALSSSNYGSEPMLQNCGISINSGFTEVEGRVLQAPRLKFGNGEDFNPRNGRWNFNQKKLIKPTKIEKWAVVNFSARCDVRGLVRDLLKCAQMKGIAIEPPFDVFEEDFHNKRSPPLVRVEKMLEFVQSKLPGAPQFLLCLLPDRKNSDLYGPWKKRNLADFGVVTQCIAPQRVNDQYLTNVLLKINAKLGGLNSMLSVEHAPSIPVVSRAPTIIIGMDVSHGSPGQTDIPSIAAVVSSREWPLISKYRACVRTQSPKVEMIDNLFKKVSAEVDDGIIRELLLDFYRSSGNRKPENIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQPGSPENVPPGTVIDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEERSETASSHGGAGAHPVPQLPRLNDNVSSSMFFC 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00658 905 ProSiteProfiles PAZ domain profile. 299 392 IPR003100 GO:0005515
Spst8g00658 905 Pfam Piwi domain 562 869 IPR003165 GO:0003676
Spst8g00658 905 Pfam Argonaute linker 2 domain 418 464 IPR032472 -
Spst8g00658 905 Gene3D paz domain 273 396 - -
Spst8g00658 905 MobiDBLite consensus disorder prediction 1 27 - -
Spst8g00658 905 CDD Piwi_ago-like 436 863 IPR045246 -
Spst8g00658 905 SMART Piwi_a_2 561 869 IPR003165 GO:0003676
Spst8g00658 905 CDD PAZ_argonaute_like 279 391 - -
Spst8g00658 905 Pfam PAZ domain 283 408 IPR003100 GO:0005515
Spst8g00658 905 Gene3D - 628 905 IPR036397 GO:0003676
Spst8g00658 905 FunFam Protein argonaute 3 629 905 - -
Spst8g00658 905 Pfam N-terminal domain of argonaute 56 217 IPR032474 -
Spst8g00658 905 ProSiteProfiles Piwi domain profile. 561 869 IPR003165 GO:0003676
Spst8g00658 905 Pfam Mid domain of argonaute 471 523 IPR032473 -
Spst8g00658 905 Pfam Argonaute linker 1 domain 229 276 IPR014811 -
Spst8g00658 905 SMART DUF1785_2 227 279 IPR014811 -
Spst8g00658 905 MobiDBLite consensus disorder prediction 872 893 - -
Spst8g00658 905 SUPERFAMILY PAZ domain 274 432 IPR036085 GO:0005515
Spst8g00658 905 SUPERFAMILY Ribonuclease H-like 545 867 IPR012337 -
Spst8g00658 905 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 51 871 - -
Spst8g00658 905 MobiDBLite consensus disorder prediction 150 173 - -
Spst8g00658 905 Gene3D - 456 622 - -
Spst8g00658 905 FunFam Protein argonaute 7 274 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00658 Spst-Chr8 6082807 6089737 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00658 47 905 Eukaryotic Initiation Factors Gene Family AT5G43810 35.288 1.72e-166 509
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00658 8 6082807 6089737 Spst8g00658 8 6082807 6089737 ECH