Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00650 ATGCTTGGAGTAGGAGCTACTAGGAAAGGCATGCAGGCTATCTGGTTGGTGCTATCGTTGTTGGTGGCTATTGCATTGGGGAATTCAGATATTGATGCACTCCTTGAATTTAAAAAAAGTATTCAGAATGATCCTTCTGGATTAGTTTTTAATTCTTGGAATTCCAAGTCTCTAGAGTCGGATGGATGTCCCAGGAACTGGTATGGAATATGGTGTAGTGAAGGCAGTGTTATATCAATCACTCTGGATAATGCTGGTTTGGTTGGTGAGTTTAATTTTCATGCAATTAGTGGCCTTACAACGCTTCGCAATTTGTCAGCTGTGAACAACCAGTTCACAGGAGAGCTCTTACATGCTGCAACAATGGAATCACTGGAATATCTTGATTTGTCCCTCAACAAGTTTAATGGACCATTACTCTCTAACTTTGTTCAGTCGCGCAAGTTAATATATCTGAATCTTTCTTCTAATGAACTTGGAGGCTCTCTTCCTATTGAGTTTAACAAACTTGAGCGGTTGAAGTATTTAGATTTGCACATGAATAACTTTTCCGGGGATATTATGCATATCTTTTATCAGATGAGCAGTGTGCTATATGTTGACTTAAGCAGCAACATGTTCTCTGGTGCACTGGATTTGGGACTTGTAGATGAATCTTTTCTGTCCTCAATTCAATATTTAAATGTTAGCCATAATTCCTTGAGTGGTGAGTTATTTGCACATGATGGTATGCCATACCTTGACAGTTTAGAGGTCTTTGATGCTAGTAATAATCAGTTAGAGGGTAATATACCTTCCTTCACTTTTGTGGTATCTCTTCGGATTCTTCGACTTGCATTCAACCAGCTGACTGGTCTGCTGCCAGAAGCTCTACTGAAGGAAAGTTCAATGATGTTGTCTGAACTGGATCTTAGTCAAAACAAGCTTCAAGGTCCCATTGGAATTATTACCTCGGTGACTCTGAGGAAGCTTAATTTATCTTCAAACAAATTGTCTGGCCCCTTACCTCTGAGGGTAGGCCACTGTGCCATCATAGATTTGAGTAATAACACTCTATCAGGTAATATCTCAAGGATTGGGTATTGGGGTAATTATGTGGAAGTTGTTGAGCTAAGTACCAACTCATTGATAGGAATGCTGCCAAACGAAACTTCTCAATTTTTAAGGTTAACTGAACTTAAGGCATCCAATAACTTATTGGAGGGCTTCCTTCCACCAATTTTGGGAACATATCCAGAGCTAAAGGAGATTGATCTTAGCCTCAACCAGCTTTCTGGATTCCTCCTACCAAGCTTTTTTGCCTCTACCAAATTGATTAATCTTAATCTCTCCAACAATAGGTTCTCTGGATCAATTCCTATTCAATTTCAACCATCAAATACTACATTAGTTTCTAATGAAAATGTTAGTCTGGTGTTTCTTGATCTTTCACACAACAACTTGAGTGGGACTCTTCCTTCAAATATGAGTAGGCTTCACAATTTGGCATATCTCAATTTATGCAGCAATAAATTGGAAGGTACTATCCCTGATGACCTTCCAGATGAGTTGAGAGTATTAAATGTGTCCCTCAATAATTTTTCTGGTGTTGTACCAGAAAACTTAAAGCAGTTTCCCGAATCGGCATTTTATCCAGGAAATACTATGTTGGTGTTTCCACATTCACAATCATCACCAAAAGATACTTCCAACCTAGGTTTGAGGGAACATCGGTTACATAAAAAGTCTGCCACTAGGATTGCCCTGATTGCATGTGTGATTGCTGGTGCTTTTGTGATGGCTTTTGTGGGCATAATAATTTATTATAGGGTTCATCACGAAAAAGTAAGGACTTCTAAACAAAATGAATCAAGAGGCATCACTCAAGAGAGTATTTTCACATCAAATCTAGTGGCACCTTACAGAAATTTGGAAGGATTACCACCTTCTCAAAGGGACTCTTCTAATGCTGCAAGAAACATTCATCCAGTGGGAAAGAAACCTATGGATGTTGGCCCTGGTGAATTAGGTAAGGATGAGGAAGGAATGTATTCCCCAATGTCTATTTTGTCACCTTCAAATCCTTCATCTTCTAAAAGCCATCAGTTTGAGAATCATGGTTCTCTCCAAGTATCCTCTCCAGATAAACTGGTTGGAGATTTGCATATATTTGATGGGTCCTTGGTGCTGACTGCGGAAGAACTTTCATGTGCTCCAGCAGAAGTTATTGGCAGGAGCTGTCATGGAACGCTATACAAAGCTACACTTAACTCTGGTCATGCATTGGCTGTCAAATGGTTAAGAGAAGGAATAACCAAAGGAAAAAAGGAGTTGGCAAGGGAAATAAAGAAACTTGGGACAATCAAACATCCAAACCTGGTTTCTATCCAGGGTTACTACCTGGGGCCAAAGGAACATGAGAAACTGATCATATCAAATTACATGAATGCACAATCATTGGACATTTATCTCCATGAAGTAGATAAAACAAATCTCCACCCTTTGTCTCTTGATGAAAGGCTGAGGGTGGCTATGGAGGTGGCTCTATGTCTGCATTTCTTACACGATGAGAAAGCCATACCTCATGGCAATCTCAAATCCACAAACATTTTGCTAGAAACTCCCAACAGAAATGTCCTCCTCACAGACTACAGCCTGCACAGGATACTCACTGCTGCAGGTACTACCGAGCAAGTTCTGAATGCCGGTGCACTTGGTTACCGGCCACCGGAGTTTGCTAGATCAAGCAAACCATGCCCTTCATTGACAAGTGATGTCTATGCATTTGGAGTGGTCTTGTTAGAGCTCCTAACAGGAAGAAATTCTGGAGAAATAGTTTCTGGGATTCCAGGGGTGGTTGACCTCACTGATTGGGTGAGGTTTTTGGCTGAACAAGACCGTTCAAGCCAGTGCTTTGATTGGTCTCTCGTAGACAAGCGTAATGGGGAGAGAACCTCTAAAATTCTTGATGATATGCTAAAGGTGGCTCTTAGATGCATCCTTCCAGCATCTGATAGGCCTGACATGAAAACCGTGTTTGATGATCTCTCAACAATAAGGTAG 3042 0.406 MLGVGATRKGMQAIWLVLSLLVAIALGNSDIDALLEFKKSIQNDPSGLVFNSWNSKSLESDGCPRNWYGIWCSEGSVISITLDNAGLVGEFNFHAISGLTTLRNLSAVNNQFTGELLHAATMESLEYLDLSLNKFNGPLLSNFVQSRKLIYLNLSSNELGGSLPIEFNKLERLKYLDLHMNNFSGDIMHIFYQMSSVLYVDLSSNMFSGALDLGLVDESFLSSIQYLNVSHNSLSGELFAHDGMPYLDSLEVFDASNNQLEGNIPSFTFVVSLRILRLAFNQLTGLLPEALLKESSMMLSELDLSQNKLQGPIGIITSVTLRKLNLSSNKLSGPLPLRVGHCAIIDLSNNTLSGNISRIGYWGNYVEVVELSTNSLIGMLPNETSQFLRLTELKASNNLLEGFLPPILGTYPELKEIDLSLNQLSGFLLPSFFASTKLINLNLSNNRFSGSIPIQFQPSNTTLVSNENVSLVFLDLSHNNLSGTLPSNMSRLHNLAYLNLCSNKLEGTIPDDLPDELRVLNVSLNNFSGVVPENLKQFPESAFYPGNTMLVFPHSQSSPKDTSNLGLREHRLHKKSATRIALIACVIAGAFVMAFVGIIIYYRVHHEKVRTSKQNESRGITQESIFTSNLVAPYRNLEGLPPSQRDSSNAARNIHPVGKKPMDVGPGELGKDEEGMYSPMSILSPSNPSSSKSHQFENHGSLQVSSPDKLVGDLHIFDGSLVLTAEELSCAPAEVIGRSCHGTLYKATLNSGHALAVKWLREGITKGKKELAREIKKLGTIKHPNLVSIQGYYLGPKEHEKLIISNYMNAQSLDIYLHEVDKTNLHPLSLDERLRVAMEVALCLHFLHDEKAIPHGNLKSTNILLETPNRNVLLTDYSLHRILTAAGTTEQVLNAGALGYRPPEFARSSKPCPSLTSDVYAFGVVLLELLTGRNSGEIVSGIPGVVDLTDWVRFLAEQDRSSQCFDWSLVDKRNGERTSKILDDMLKVALRCILPASDRPDMKTVFDDLSTIR 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00650 1013 Gene3D Ribonuclease Inhibitor 29 145 IPR032675 -
Spst8g00650 1013 Gene3D Ribonuclease Inhibitor 146 214 IPR032675 -
Spst8g00650 1013 MobiDBLite consensus disorder prediction 680 703 - -
Spst8g00650 1013 Pfam Protein tyrosine and serine/threonine kinase 734 955 IPR001245 GO:0004672|GO:0006468
Spst8g00650 1013 Pfam Leucine rich repeat N-terminal domain 28 73 IPR013210 -
Spst8g00650 1013 Gene3D Ribonuclease Inhibitor 215 559 IPR032675 -
Spst8g00650 1013 SUPERFAMILY Protein kinase-like (PK-like) 733 1009 IPR011009 -
Spst8g00650 1013 Gene3D Phosphorylase Kinase; domain 1 736 808 - -
Spst8g00650 1013 PANTHER OS07G0626500 PROTEIN 14 116 - -
Spst8g00650 1013 MobiDBLite consensus disorder prediction 639 703 - -
Spst8g00650 1013 FunFam Leucine-rich repeat receptor-like protein kinase 715 807 - -
Spst8g00650 1013 SUPERFAMILY L domain-like 44 354 - -
Spst8g00650 1013 Gene3D Transferase(Phosphotransferase) domain 1 809 1013 - -
Spst8g00650 1013 ProSiteProfiles Protein kinase domain profile. 730 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00650 1013 SUPERFAMILY L domain-like 344 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00650 Spst-Chr8 6019047 6024010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00650 34 609 Receptor kinase-like Gene Family AT1G55610 28.205 1.28e-40 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst8g00650 PK_Tyr_Ser-Thr 6.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00650 - - gmx:100809980 1737.24