Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00644 ATGGCCATGGAAGATATTCAAGCAACAACAACTGAAGGACAACCCTTGAGATGTAAAGCTGCAATTTGCCGTAAGCCAGGTTCTCCACTGAGTATTGAGGAGATCATTGTGGCACCTCCAATGCCTCGTGAAGTTCGGATCCGTGTTATATGCACCTCTCTCTGTCATAGCGATGTTACTTTTTGGAAGATGCAGGTCCCTCCTGCAATTTTTCCAAGAATCTTCGGTCATGAGGCTGTTGGGGTTGTGGAAAGTGTAGGAGAAGATGTAACTGAGGTTACAAAAGGAGATGTGGTTGTCCCAATTTTCTTATCTGATTGTGGGGAGTGTATAGATTGCAAATCAAGCAAGAGCAATCTTTGTTCAAAATTTCCTTTCAAGTTGTCTCCTTGGATGCCTAGATATGCCACATCAAGATTCAAGGATTTAAATGGAGAGATCATACACCATTTCTTGTCTGTTTCTAGTTTTAGTGAGTACACTGTGGTTGACATTGCTCATCTAACCAAGATTGACCCAGCAATACCACCCAACAGGGCATGCCTACTTAGTTGTGGTGTATCAACGGGGGTAGGTGCTGCTTGGATAACTGCAGGTGTGGAGCCAGGGTCTACAATAGCTATTTTTGGGCTGGGAAGTATTGGATTAGCTGTTGCTGAGGGAGCTAGACTTTGTGGAGCAACTAAGATTATAGGTGTGGATGTCAACCCAGAAAAATATGAAATTGGAAAAAAGTTTGGACTCACTGACTTTGTCCATGCTGGAGAAAGTGAAGATAAATCTGTGAGCCAGATAATCATAGAGATGACTGCAGGGGGAGCAGACTATTGCTTCGAATGTGTTGGCATGGCATCCTTGGTGCAAGAAGCATATGCTTCTTGTAGAAAGGGTTGGGGAAAAACAATAGTTTTAGGAGTGGACAAGCCAGGATCCAAGGTGAGCCTTAATAATAGTGAGGTGCTGGCTAGTGGGAAGAGCCTCACGGGATGCTTATTTGGAGGACTCAAACCTAAGTCTCATGTACCTATTCTCCTTAAACGCTACATGGATAAGTGCCATGATGCCAAGTTTATCTCCAATTACCAACAGGAACTGAATTTGGATGAGTTTGTCACACATGAGGTGCAGTTTCAAGATATCAATAAGGCTTTTGATTTATTGCTTGAAGGAGAGAGTCTCCGATGTGTGATTTGGATGGACAAATGA 1206 0.432 MAMEDIQATTTEGQPLRCKAAICRKPGSPLSIEEIIVAPPMPREVRIRVICTSLCHSDVTFWKMQVPPAIFPRIFGHEAVGVVESVGEDVTEVTKGDVVVPIFLSDCGECIDCKSSKSNLCSKFPFKLSPWMPRYATSRFKDLNGEIIHHFLSVSSFSEYTVVDIAHLTKIDPAIPPNRACLLSCGVSTGVGAAWITAGVEPGSTIAIFGLGSIGLAVAEGARLCGATKIIGVDVNPEKYEIGKKFGLTDFVHAGESEDKSVSQIIIEMTAGGADYCFECVGMASLVQEAYASCRKGWGKTIVLGVDKPGSKVSLNNSEVLASGKSLTGCLFGGLKPKSHVPILLKRYMDKCHDAKFISNYQQELNLDEFVTHEVQFQDINKAFDLLLEGESLRCVIWMDK 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00644 401 SUPERFAMILY GroES-like 361 398 IPR011032 -
Spst8g00644 401 PANTHER ALCOHOL DEHYDROGENASE 13 397 - -
Spst8g00644 401 Pfam Zinc-binding dehydrogenase 214 334 IPR013149 -
Spst8g00644 401 Pfam Alcohol dehydrogenase GroES-like domain 43 170 IPR013154 -
Spst8g00644 401 FunFam Alcohol dehydrogenase 6 21 200 - -
Spst8g00644 401 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 175 350 IPR036291 -
Spst8g00644 401 FunFam S-(hydroxymethyl)glutathione dehydrogenase 190 330 - -
Spst8g00644 401 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 76 90 IPR002328 GO:0008270|GO:0016491
Spst8g00644 401 Gene3D - 190 330 - -
Spst8g00644 401 SUPERFAMILY GroES-like 11 196 IPR011032 -
Spst8g00644 401 Gene3D - 21 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00644 Spst-Chr8 5989676 5992497 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00644 43 211 Monolignol Biosynthesis Gene Families AT4G37970 27.907 1.20e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00644 K00121 - gmx:100806887 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00644 8 5989676 5992497 Spst8g00644 8 5989676 5992497 ECH