Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00629 ATGTCCGATGACATGCTCATTCATTTCTCTTCCAACTCTTCCAACCAATCAGATCAGTCTCTCCCCACAAAGATTGCAAAGTTGGAAGCTCGTATGGTTGGTAAAGGTTCCTCAACCTCTGCTCAGCAACCAGGTCGGTCCTCTTTGTCTGTTCCTTCGGCTGGGAAATTTGGAGCTGCAGAAAATTCGGCTGAACCATCCACTTCAAGTGATTCTGATGATGATAATGGTGGGGCATTCTTGATACAAGCCAACACACAGAAGCGCCAAAAACTTCAAGAAGATGGCAACACTAGTGTTTTTGAACGTGTTGAGGTTGTTACTGATGGAAAGCAAACTAGTTTGGACGCTGTTGAGACAAAAATGCATGTTGAAATGAGTAGAAAGAAACATGGTCGTGGAAGAGGGAGTTCTGGTTCAGGTAGAGGCCGGGGTTCCAGAGTTAATGATCAGACCAAAACTCCAATTTCTCCTCCAGCTGTTTTGGCTTCAAATGGTCAGATCGAGAATGTATACCATAAAAGTGGCAGACCCAGCGATCAATTTCATAGTAATAATTGTGTTTCATTAGAGGAGGTTGCATCTTTACAAGCTAAAGTTGTTGCGTTGGAGGAGGAATTGCGTAAAGCAAAGCAAGAAGCCGTTGATTATCAGAACCTTACTCAACAGCTAGAAAAGGAAATGAAGGAAATGACTGATCATGAACAACAAATGAAGCCTAAGAGAATGAAAATAATATCTGACTTGCTGATATCTGTTTCAAAGGCTGAAAGACAAGAAGCAAGGCTGAAAGTACGACAAGACTCATTGAGACTTGGAAATGTTGGTGTAATCAGAGCTGGAACTGTCATATCTGAAACCTGGGAAGATGGTCAAGCTTTAAAGGATATGAATGCCCAGCTTAAACAACTAATTGAAACGAAGGAGGCAATCGAGCGGCATCGCAAATTGTTTAAGAAAAAGCAATCTGATAAGGGTGATGGAACAGATGCAGAGGCTGGATTACCAGAAGATATTCTAATTCACGATGAAATTTACAAATGTCGATTAGCTAGCCTTAAAAGAGAAGAGGAAATTATTTTGCGAGAGAGGGATCGTTATGAAACAGAGAAGGGGAGATTAATTCGTGAGATGAAACGTATACGGGATGAAGATGGTTCACGGTTTAACAACTTCCAGATTCTAAATCATCGTTATGCCCTTCTTAATCTTCTTGGGAAGGGAGGATTTAGTGAGGTGTACAAGGCTTTCGACTTGGTGGACCATAGATATGTTGCTTGCAAGCTTCATGGTTTAAATGCTCAATGGAGTGAAGAGAAGAAGCAGAGTTACATAAGACATGCAATTCGGGAGTATAATATTCACAAGACTCTTGTACATCGTCACATTGTTCGTTTGTGGGACATCTTTGAGATTGATCAAAACACATTCTGCACTGTTCTAGAGTATTGTAGTGGGAAGGATCTTGATGCTGTCCTTAAAGCAACACCTATATTACCTGAGAGGGAGGCTAAGGTCATCATGGTTCAGATTTTTCAAGGCCTTATTTACATGAATAAAAGAACACAGAAGATTATCCATTATGATTTGAAGCCTGGAAATGTTCTGTTTGATGAGCTTGGTGTTGCCAAAGTGACTGATTTTGGTCTTAGTAAGATAGTTGAGGATGATGTGGGATCTCAGGGAATGGAACTTACATCCCAGGGAGCTGGAACATATTGGTATTTGCCTCCTGAATGCTTTGAGCTCAGCAAGACACCTCTTATATCATCGAAGGTAGATGTCTGGTCTGCTGGTATTTTGTATTATCAAATGCTCTTTGGCCGACGCCCTTTCGGGCATGACCAAACCCAAGAGAGGATACTTCGTGAAGACACAATTATTAAGGCACGCAAGGTTGAATTTCCCTCTAGACCTACCATTTCTAACGAGGCAAAGGATTTTATCCGACGGTGTCTAACATATAACCAGGCTGAGAGACCAGATGTATTAACCATTGCTCAAGACCCATATCTCACTTTCTCAAAAAAGTAA 2034 0.4125 MSDDMLIHFSSNSSNQSDQSLPTKIAKLEARMVGKGSSTSAQQPGRSSLSVPSAGKFGAAENSAEPSTSSDSDDDNGGAFLIQANTQKRQKLQEDGNTSVFERVEVVTDGKQTSLDAVETKMHVEMSRKKHGRGRGSSGSGRGRGSRVNDQTKTPISPPAVLASNGQIENVYHKSGRPSDQFHSNNCVSLEEVASLQAKVVALEEELRKAKQEAVDYQNLTQQLEKEMKEMTDHEQQMKPKRMKIISDLLISVSKAERQEARLKVRQDSLRLGNVGVIRAGTVISETWEDGQALKDMNAQLKQLIETKEAIERHRKLFKKKQSDKGDGTDAEAGLPEDILIHDEIYKCRLASLKREEEIILRERDRYETEKGRLIREMKRIRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKAFDLVDHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLVHRHIVRLWDIFEIDQNTFCTVLEYCSGKDLDAVLKATPILPEREAKVIMVQIFQGLIYMNKRTQKIIHYDLKPGNVLFDELGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILYYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPTISNEAKDFIRRCLTYNQAERPDVLTIAQDPYLTFSKK 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00629 677 MobiDBLite consensus disorder prediction 35 50 - -
Spst8g00629 677 MobiDBLite consensus disorder prediction 1 23 - -
Spst8g00629 677 MobiDBLite consensus disorder prediction 62 94 - -
Spst8g00629 677 Gene3D Transferase(Phosphotransferase) domain 1 390 677 - -
Spst8g00629 677 Coils Coil 193 237 - -
Spst8g00629 677 Coils Coil 350 384 - -
Spst8g00629 677 MobiDBLite consensus disorder prediction 1 96 - -
Spst8g00629 677 Pfam Protein kinase domain 400 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00629 677 Coils Coil 677 677 - -
Spst8g00629 677 MobiDBLite consensus disorder prediction 123 163 - -
Spst8g00629 677 FunFam Serine/threonine-protein kinase TOUSLED 390 677 - -
Spst8g00629 677 CDD STKc_TLK 398 671 - -
Spst8g00629 677 SMART serkin_6 399 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00629 677 ProSiteProfiles Protein kinase domain profile. 399 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00629 677 Coils Coil 294 321 - -
Spst8g00629 677 PANTHER MIXED LINEAGE PROTEIN KINASE 11 674 - -
Spst8g00629 677 ProSitePatterns Protein kinases ATP-binding region signature. 405 428 IPR017441 GO:0005524
Spst8g00629 677 MobiDBLite consensus disorder prediction 142 163 - -
Spst8g00629 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 525 537 IPR008271 GO:0004672|GO:0006468
Spst8g00629 677 SUPERFAMILY Protein kinase-like (PK-like) 391 673 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00629 Spst-Chr8 5898619 5905912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00629 382 677 MAP Kinase Kinase Kinase AT3G13530 27.090 1.38e-28 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Spst8g00629 Pkinase 1.5e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00629 K08864 - gmx:100789927 1190.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00629 8 5898619 5905912 Spst8g00629 8 5898619 5905912 ECH