Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00608 ATGGCCACAACTCTGTGGCCCGCCGCCACCATAACCCTGTTACTACTCCTCCTCTGTTCGTCCATTCCAAATTCTGAATCGCAACAAGAGTACGTCAATAACAAACAACTGAATTGCCACCAAAACGACACCAATTCCACAAACGGCAACCTCTGCAACAGTGTTTCGTCATGCACATCCTACCTCACCTTCAAATCTTCCGTCCCAGATTACACAACCCCTGTCTCCATCGGTTACCTCCTCAACTCCACCGCCGCCGACATCGCCTCCGCAAACAACATCACCGACGTCCAATCCATCGCCGTCGACACCCTCATCACCGTCCCCGTCACGTGCTCCTGCTCCGGCCCCTACTACCAGCACAACGCCTCTTACAAAATCAAAGCACTAGGCGAAACCTACTTCGGCATCGCCAACAACACCTACCAGTCCCTCACCACGTGCCAGGCTCTCATGGCCCAAAACACCTACGGCGAACGTGACCTTGTTGCAGGCCTCAACATCCACGTGCCTCTGAGGTGCGCCTGCCCCACCCGGAATCAGAGCGAAGCAGGGTTCAAGTACTTGCTAACTTACTTGGTCTCTAGAGGAGAATCGATTTCTTCAATTGCTGAGATCTTTGGTGTTGACCGACAGAGCATCCTCGAAGCAAACCAGCTTTCTGACACTTCGGTTATTTTCTACTTCACGCCGATTTCGGTTCCTTTAAAAACAGAGCCACCGACGAATATACAGAGAGCAGCGGCTCCGCCAGATAGCTCCCCGCCGCCTCCGGCGGTGGCGGTGGCGGGAGATTCCAACTCTTCCAAAAAATGGGTTATTGTCGGAATTGTGGTTGGGGTTGTTGTGCTGCTTCTTGTCTGCGCTGCTCTGTTTTTCTTCTGTTTCTATCGGCGGCGACTTGTGCAACCGCCGTCGCCGACTCCGGTGGCGAAGGCTTTCTCGGGCTCTACTACCACGGAGGTGACTATTCCAACGACGCAGTCGTGGTCTCTTTCTTCGGAAGGGGTTCGTTACGCGATTGAGTCATTGAGTGTGTACAAGTTTGAGGAGTTGCAGAAAGCTACGGGGTTCTTCAGTGAAGAGAACAAAATCAAGGGTTCTGTTTATAGGGCTTCTTTCAAGGGTGATTATGCTGCGGTTAAGATTCTCAAAGGGGATGTGTCGGGTGAGATCAACATTCTCAAGAGGATTAACCACTTCAATATTATAAGGTTGTCGGGATTTTGTGTTCACAAAGGTGACACTTATCTTGTGTACGAGTTTGCTGAGAATGATTCTCTCGAGGATTGGCTTCATAGTGGTACTAAGAAGTACGAGAATTCGGTGTCTCTGAGTTGGGTGCAGAGGGTTCATATAGCTCATGATGTTGCTGACGCGCTTAATTACCTTCATAACTATACTAGTCCTCCTCATGTGCATAAGAATTTGAAGAGTGGGAACGTGCTCTTGGATGGGAATTTCAGGGCAAAGGTTTCAAATTTTGGGTTGGCGAGAACGGTGGAGGGTGAAGGGGACGATGGGGGGTTTCAATTGACAAGGCATGTGGTGGGGACTCAAGGGTACATGCCACCTGAGTATATTGAGAACGGTTTGATCACTCCAAAGATAGACGTTTTTGCGCTTGGGGTGGTGCTTTTGGAGCTTCTTTCGGGGAGAGAGGCTGTTGGTAGGGACAAGAATGGATCTGGGGAGCAGATGCTGTCGGTGACTGTGAATCAGGTGCTTGAAGGCGAGAACGTTAGAGAAAAACTCAGAGGTTTCATGGATCCAAATTTGAGAGATGAATATCCTTTGGAGCTGGCTTATTCCATGGCTGAACTTGCCAAACGCTGTGTTGCTCGTGACCTCAATTCAAGACCACAGATTTCTGAAGTTTTAATGACTTTGTCCAAGATTCAATCCTCTACATTGGATTGGGATCCGTCTGATGAGCTTGAACGGTCTAGATCTGTTAGCCAAATCTCTGATAGCAGATAG 1980 0.4949 MATTLWPAATITLLLLLLCSSIPNSESQQEYVNNKQLNCHQNDTNSTNGNLCNSVSSCTSYLTFKSSVPDYTTPVSIGYLLNSTAADIASANNITDVQSIAVDTLITVPVTCSCSGPYYQHNASYKIKALGETYFGIANNTYQSLTTCQALMAQNTYGERDLVAGLNIHVPLRCACPTRNQSEAGFKYLLTYLVSRGESISSIAEIFGVDRQSILEANQLSDTSVIFYFTPISVPLKTEPPTNIQRAAAPPDSSPPPPAVAVAGDSNSSKKWVIVGIVVGVVVLLLVCAALFFFCFYRRRLVQPPSPTPVAKAFSGSTTTEVTIPTTQSWSLSSEGVRYAIESLSVYKFEELQKATGFFSEENKIKGSVYRASFKGDYAAVKILKGDVSGEINILKRINHFNIIRLSGFCVHKGDTYLVYEFAENDSLEDWLHSGTKKYENSVSLSWVQRVHIAHDVADALNYLHNYTSPPHVHKNLKSGNVLLDGNFRAKVSNFGLARTVEGEGDDGGFQLTRHVVGTQGYMPPEYIENGLITPKIDVFALGVVLLELLSGREAVGRDKNGSGEQMLSVTVNQVLEGENVREKLRGFMDPNLRDEYPLELAYSMAELAKRCVARDLNSRPQISEVLMTLSKIQSSTLDWDPSDELERSRSVSQISDSR 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00608 659 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 12 643 - -
Spst8g00608 659 SMART LysM_2 191 235 IPR018392 -
Spst8g00608 659 SMART LysM_2 124 171 IPR018392 -
Spst8g00608 659 Gene3D Phosphorylase Kinase; domain 1 323 422 - -
Spst8g00608 659 SUPERFAMILY LysM domain 190 235 IPR036779 -
Spst8g00608 659 FunFam PTI1-like tyrosine-protein kinase 3 423 644 - -
Spst8g00608 659 Pfam LysM domain 192 235 IPR018392 -
Spst8g00608 659 CDD LysM 191 227 IPR018392 -
Spst8g00608 659 Gene3D LysM domain 190 247 IPR036779 -
Spst8g00608 659 MobiDBLite consensus disorder prediction 641 659 - -
Spst8g00608 659 ProSiteProfiles Protein kinase domain profile. 308 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00608 659 Pfam Protein kinase domain 387 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00608 659 ProSiteProfiles LysM domain profile. 190 234 IPR018392 -
Spst8g00608 659 Gene3D Transferase(Phosphotransferase) domain 1 423 651 - -
Spst8g00608 659 SUPERFAMILY Protein kinase-like (PK-like) 335 628 IPR011009 -
Spst8g00608 659 MobiDBLite consensus disorder prediction 240 262 - -
Spst8g00608 659 MobiDBLite consensus disorder prediction 639 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00608 Spst-Chr8 5742040 5744019 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00608 1 652 Receptor kinase-like Gene Family AT2G33580 52.838 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Spst8g00608 Pkinase 7.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00608 - - gmx:100818534 1024.62