Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00601 ATGGTCTGCACTAAGCTTTCATTAATTCTCTGTTCACTCTTAGGCCTCCATTTCACTCAACTTTTACCCTTTTCTCCTTTTGCTGCGTTTGCTGCCACCATTGCTGAAAACCAAGTGAGGGAAGCTGGTGCTCTACTTGAGTGGAAAGCTAGCCTTGAAAACCAAAGCCAAACTTCTCTGTCTTCATGGACCAAAGGTGTCAGTCATTGCAAGTGGGAAGAAATCATTTGTGACAAATCCAACTCTGTCACCACTATAAATGTAGCAAATCATGGGTTAAAAGGTACTCTTCACACTCTCAACTTCTCATCCTTTCCCAACCTGCTAACTCTGGATGTTAGTAACAATAGTTTCAATGGTACTATTCCTCACCAAATTGCTAACTTATCCAGAGTTTCTCAGTTGATAATGAACAAGAATAATTTTGATGGTCCAATCCCCATTTCCATGGTGAAGTTGGCTACCTTGAAGATTTTAAACTTGAAAAACAATCACCTCTCTGGCCCTCTTCCTGAGGAGATTGCTGAGTTGAGGAACCTAGAGAGTCTGTTATTCGAATCCAATAACCTTTTTGGTACCATTCCTCCAACAATTGGAAGGATGACCAACCTTGTTGAACTTAATTTGCAACTTAACTCATTTAATGGCACAATCCACCCTTCAATTAGAAACTTGACAAATTTAAAATTCCTCCGGCTCCAACAAAATAGTCTCTCTGGTCGCATTCCACATTTCATAGGAGACATGACCAATTTGCTTGTTCTTGAGATCGATCAAAACAAATTTACAGGACCAATTCCTCCCCATATTGGAAACTTGACGAAGATGGTCAATCTGTCCTTGGCCGTGAACATGCTTTCTGGACCAATTCCTCCCTCGCTTGGAAACTTGGTCAATCTAAAGGCGTTGGAGCTTTCCAGGAACGATCTATCCGGAGTTATTCCTTCCACCTTAGGAAATTTAACTAGCCCCATCGCGTTCATAGTGTCATCTAACAAACTTGAAGGCAGATTACCACCAGGAATGAATAACTACACCAATTTAATAAACTTACAACTATCTAACAACAGTTTTAGTGGCCCTCTGCCACAAAATATTTGCCTTGGTGGGTCACTACTCTTATTTACTGCTCAAAATAATAATTTCACGGGTCCAGTTCCAAAAAGCCTGAAAAATTGCTCCACTCTTCTAAGACTCAGACTGGATGGAAACCAGTTGAGTGGAAATATATCAGATGATTTTGGTGTTTATCCAGTGTTGAACTACATTGATCTGAGTAGGAATAACTTTTATGGCCACATTTCCCCAAATTGGGCAAAGTGTCCTGGTCTCTCAGCCATTAAAATGTCCAACAATAATTTATCTGGTAGTATACCGCCAGAACTCAGCCAGGTACCCAATTTAGGAGAACTTGCCTTGTCTTCAAATCATTTAACAGGGAAAGTTCCAAAAGAACTTGAGAACTTGACCTCTTTGTTGAAGTTATCAATAAGCAACAATGAACTTTCCGGCACTATTCCTACGGAAATAGGTGCCTTGTCCAAGCTTGACACTTTGGAGCTTTCAGCAAATAATTTAGATGGTCCAATTCCAAAACGGTTGGGGGAGTTATTCAAGTTAGTTAACTTGAATTTGAGCAAAAACAGATTGACAGAAAGCATTCCATTGGAATTTAGGCGTTTGCAAGCTCTTGAAAGTCTTGATCTTAGTTACAATTTTTTAAATGGAGAAATACCATCAGCACTTGCAAGTATGACAAGATTGGAAACGTTAAACCTCTCTCACAACAATCTCTCAGGAGCCATTCCATCTAATTTTAAGGATGGCTTAACAACGGTTGACATATCTAACAATCAATTACGGGGTCCAATTCCTAACAGTCGAGCCTTTCTCAATGCTTCATGTGATGCATTCAAAAATAATAAAGGCTTGTGTGGAAATGTCCGTTGTTTAGTGCCTTGCAGCAGCCGTAATGATAAAGGGAAAAGAAATGTCACCAGGTTAGCATTAGGCCTTACTTTGGGTGCTCTACTTCTAGTGGTACTCGTGGTTGGAGTTTTGTTATGTATTCGCTACAGAAGAGCAACAGAAGGCAAAAAGGAGGAGGCTAAAGAAGAAAAAACTCATGATCATTATGCCATATGGAGTTATGATGGAAAATTAGTGTATGAAAATATCATCGATGCCACAGAGGGGTTTGATGACAAATATCTCATTGGAGAGGGAGGGTCAGCATCTGTTTATAAAGCTAAATTACCGACAGGAGAGATTGTTGCTGTGAAAAAACTTAATGCTGCATCCAATGAAGAAACACCGGATTTAAGAGCTTTTAAAACTGAGGTTGAAGCCTTGGCAGAAATCAAGCATCGTAACATTGTGAAGTCGCTTGGATATTGTTTACATCCACGTTTCTCCTTTTTAGTTTATGAGTTCCTTGAGGGGGGTAGTTTGGATAAAGTACTCACCAACGATACGCGTGCAACAATGTTTGATTGGAACATGAGGGTAAAGGTTGTTAAAGGTGTGGCAAATGCTTTGTACCATATGCATCATGGTTGCTTTCCTCCTATTATTCATCGAGACATATCAAGCAAGAATATTCTTATAGATTCGGATTATGAAGCCCGCATTTCTGACTTTGGAACAGCTAAAATTCTGAATCCTGATTCACGCAATTTAGCCTCGTTTGCAGGCACATATGGGTATGCTGCACCAGAGCTTGCTTATACCATGGAAGTGAATGAAAAATGTGATGTGTTCAGTTTTGGAGTGCTTTGTTTGGAAATAATGATGGGAAAGCATCCAGGAGATCTCATTTCATTATTATTTTCACCCTCTGAAACACCATCAGCGTATAATTTGCTTTTGAAAGATGTGTTGGACCAAAGACTACCCCTTCCGGTGAAGCCAGTTGTTGAGGAGGTGATCTTGATTGTGAAAATAGCATTTGCTTGCTCAAGTGAAAGTCCACGTTTTCGTCCAAGCATGGAACAAGTGTATAACGAGTTTGTGATGCCAAAACCATCTTCACTCAATTCACTCTCCATCATCACACTTGGTCAACTCGTGAATTACTGA 3078 0.3993 MVCTKLSLILCSLLGLHFTQLLPFSPFAAFAATIAENQVREAGALLEWKASLENQSQTSLSSWTKGVSHCKWEEIICDKSNSVTTINVANHGLKGTLHTLNFSSFPNLLTLDVSNNSFNGTIPHQIANLSRVSQLIMNKNNFDGPIPISMVKLATLKILNLKNNHLSGPLPEEIAELRNLESLLFESNNLFGTIPPTIGRMTNLVELNLQLNSFNGTIHPSIRNLTNLKFLRLQQNSLSGRIPHFIGDMTNLLVLEIDQNKFTGPIPPHIGNLTKMVNLSLAVNMLSGPIPPSLGNLVNLKALELSRNDLSGVIPSTLGNLTSPIAFIVSSNKLEGRLPPGMNNYTNLINLQLSNNSFSGPLPQNICLGGSLLLFTAQNNNFTGPVPKSLKNCSTLLRLRLDGNQLSGNISDDFGVYPVLNYIDLSRNNFYGHISPNWAKCPGLSAIKMSNNNLSGSIPPELSQVPNLGELALSSNHLTGKVPKELENLTSLLKLSISNNELSGTIPTEIGALSKLDTLELSANNLDGPIPKRLGELFKLVNLNLSKNRLTESIPLEFRRLQALESLDLSYNFLNGEIPSALASMTRLETLNLSHNNLSGAIPSNFKDGLTTVDISNNQLRGPIPNSRAFLNASCDAFKNNKGLCGNVRCLVPCSSRNDKGKRNVTRLALGLTLGALLLVVLVVGVLLCIRYRRATEGKKEEAKEEKTHDHYAIWSYDGKLVYENIIDATEGFDDKYLIGEGGSASVYKAKLPTGEIVAVKKLNAASNEETPDLRAFKTEVEALAEIKHRNIVKSLGYCLHPRFSFLVYEFLEGGSLDKVLTNDTRATMFDWNMRVKVVKGVANALYHMHHGCFPPIIHRDISSKNILIDSDYEARISDFGTAKILNPDSRNLASFAGTYGYAAPELAYTMEVNEKCDVFSFGVLCLEIMMGKHPGDLISLLFSPSETPSAYNLLLKDVLDQRLPLPVKPVVEEVILIVKIAFACSSESPRFRPSMEQVYNEFVMPKPSSLNSLSIITLGQLVNY 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00601 1025 SUPERFAMILY Protein kinase-like (PK-like) 716 1002 IPR011009 -
Spst8g00601 1025 ProSitePatterns Protein kinases ATP-binding region signature. 739 762 IPR017441 GO:0005524
Spst8g00601 1025 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 345 658 - -
Spst8g00601 1025 Gene3D Transferase(Phosphotransferase) domain 1 812 1010 - -
Spst8g00601 1025 Pfam Protein kinase domain 735 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00601 1025 ProSiteProfiles Protein kinase domain profile. 733 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00601 1025 FunFam Nuclear pore complex protein NUP107 38 193 - -
Spst8g00601 1025 Gene3D Ribonuclease Inhibitor 38 251 IPR032675 -
Spst8g00601 1025 FunFam Leucine-rich receptor-like protein kinase family protein 222 315 - -
Spst8g00601 1025 Gene3D Ribonuclease Inhibitor 252 326 IPR032675 -
Spst8g00601 1025 Pfam Leucine rich repeat 539 598 IPR001611 GO:0005515
Spst8g00601 1025 Pfam Leucine rich repeat 420 478 IPR001611 GO:0005515
Spst8g00601 1025 SMART LRR_typ_2 585 608 IPR003591 -
Spst8g00601 1025 SMART LRR_typ_2 297 320 IPR003591 -
Spst8g00601 1025 SMART LRR_typ_2 537 560 IPR003591 -
Spst8g00601 1025 SMART LRR_typ_2 465 488 IPR003591 -
Spst8g00601 1025 SMART LRR_typ_2 105 129 IPR003591 -
Spst8g00601 1025 SMART LRR_typ_2 561 584 IPR003591 -
Spst8g00601 1025 SMART LRR_typ_2 177 201 IPR003591 -
Spst8g00601 1025 SMART LRR_typ_2 225 249 IPR003591 -
Spst8g00601 1025 SMART LRR_typ_2 489 513 IPR003591 -
Spst8g00601 1025 FunFam MDIS1-interacting receptor like kinase 2 812 1009 - -
Spst8g00601 1025 Gene3D Ribonuclease Inhibitor 327 657 IPR032675 -
Spst8g00601 1025 PANTHER LEUCINE RICH REPEAT KINASE 2 295 1009 - -
Spst8g00601 1025 Pfam Leucine rich repeat N-terminal domain 41 78 IPR013210 -
Spst8g00601 1025 FunFam Leucine-rich repeat receptor protein kinase MSP1 696 811 - -
Spst8g00601 1025 SUPERFAMILY L domain-like 67 408 - -
Spst8g00601 1025 Gene3D Phosphorylase Kinase; domain 1 693 811 - -
Spst8g00601 1025 SUPERFAMILY L domain-like 375 646 - -
Spst8g00601 1025 ProSitePatterns Tyrosine protein kinases specific active-site signature. 857 869 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00601 Spst-Chr8 5689348 5692526 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00601 39 905 Receptor kinase-like Gene Family AT4G08850 45.143 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst8g00601 Pkinase 2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00601 - - vra:106762950 1568.13