Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00568 ATGAGGAAAAGGGAGAGGGAGAATCCTTGTGGCGTGTGTGGCCACTATCACAAATATGAAGAAGGAGAAGTGTGTTCGATTTGCGGTCACCGGATTCCGGTTGGATCGGAGAAAACATCGATACAAGTTAGTGCTTTTCCTTCCGTGATTCTGCCGGAATTTCTTTACCTGGGAAGCTACGACAACGCATCGCGGTCGGAGCTTCTAAAGACTCAGGGGATTTCTCGTATCCTGAATGTGGAGTGGTTTATATTGGGATTTTCATTACAGCATACTTCTAATTTCTTAGCGCCAATGCATGGGAATGATGATGCCAGGCCCGGGAAAACGCGTTACAGTCAGGAAAACTTCAGAAACCTTGATGTTACTGTTCCATCTTGTCAAAATCTCTACAAGAACTCATTTACCTATCACTGCCTCCCAGATGACAAAACTTTGCCATTTGATGAAGCAATTCAGTTTCTAGGGCTTGTGCCTGCTCTGATGACGGTGATCCTGTTGTTGGATAGCCTGACAATGTTTGTAATGTTGTTGAGGTTGATAGGAGAGCAATGTGAAAAGGATCAGGAGCGTGTTCTGGTTCATTGCATGTCAGGAAAGAGTAGGTCTCCAGCTATTGTGATTGCATACTTGATGAAGTCCAAAGGATGGAGACTTGCACAGAGTTATCAGTGGGTAAAGGAACGTAGACCTTCTGTTGAATTAACTCAAGATAAAGACACCTCTGGACTTGGGGTGGCCACAGGTGTGTACCAGCAACTTCAAGATTATGAGCAGAAAATCTATGGACCGATAGATAGCGGCGGCTCTCTTCTGCCTAGTTTCTCGCCTGCTGCGCTTCCTTCAATTAGCTTTGGTTTTCCAAAGATCCATGATCCGAATCAACTTCCTTCCTTCAGCACTGCCGGAACTCCTTCAATCTTCACCCGACCCCCCCTAGACATTGCACCTACAGAGTTTACATTTGGCGCTGGACCGATGCAGAAGAATGTGGCTGGAAGTCCCTTTAATGCCAACCAACCTAATCCAAATGGTACTGATATCCAAATGGATGGTTCTTGA 1062 0.4557 MRKRERENPCGVCGHYHKYEEGEVCSICGHRIPVGSEKTSIQVSAFPSVILPEFLYLGSYDNASRSELLKTQGISRILNVEWFILGFSLQHTSNFLAPMHGNDDARPGKTRYSQENFRNLDVTVPSCQNLYKNSFTYHCLPDDKTLPFDEAIQFLGLVPALMTVILLLDSLTMFVMLLRLIGEQCEKDQERVLVHCMSGKSRSPAIVIAYLMKSKGWRLAQSYQWVKERRPSVELTQDKDTSGLGVATGVYQQLQDYEQKIYGPIDSGGSLLPSFSPAALPSISFGFPKIHDPNQLPSFSTAGTPSIFTRPPLDIAPTEFTFGAGPMQKNVAGSPFNANQPNPNGTDIQMDGS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00568 353 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 172 241 IPR000387 GO:0016311|GO:0016791
Spst8g00568 353 Gene3D Protein tyrosine phosphatase superfamily 34 263 IPR029021 -
Spst8g00568 353 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 123 156 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
Spst8g00568 353 ProSitePatterns Tyrosine specific protein phosphatases active site. 194 204 IPR016130 GO:0016311|GO:0016791
Spst8g00568 353 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 263 IPR020422 GO:0006470|GO:0008138
Spst8g00568 353 MobiDBLite consensus disorder prediction 332 353 - -
Spst8g00568 353 MobiDBLite consensus disorder prediction 328 353 - -
Spst8g00568 353 SMART dsp_5 46 260 IPR020422 GO:0006470|GO:0008138
Spst8g00568 353 Pfam Dual specificity phosphatase, catalytic domain 179 233 IPR000340 GO:0008138|GO:0016311
Spst8g00568 353 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 237 IPR029021 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00568 1 236 Protein tyrosine phosphatase (PTP) family AT2G04550 53.556 3.96e-83 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00568 K04459 - gmx:100808721 473.011