Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00549 ATGGCTTCTTCTTCTTGTTCAACCTTTGTGTTCGGTTTGGCCCTTTTGGTCATTGTGTTTAGCAGTGCCAATGCAACACTTTACACAAACTTCTACTCCAGTTCTTGCCCAAAACTCTTTGACACTGTGAAACGCGAAGTGGAATCAGCCATATCAAAGGAGACCCGCATGGGTGCTTCTCTCCTACGTTTGTTCTTCCACGATTGCTTTGTTAATGGGTGTGATGGGTCAATTCTGCTTGATGATACATCAAGCTTCACCGGAGAGAAGAACGCAGGTCCTAACAGGAACTCAGCTCGTGGTTTTGATGTTATCGACAAAATCAAATCAGCTGTGGAGAAACACTGCCAGGGTGCTGTCTCCTGTGCTGATATCCTTGCCATTGCTGCCAGAGATTCCGTTCACATCCTTGGTGGCCCAACTTGGGACGTGAAACTTGGAAGAAGAGACTCCAAGGCAGCAAGCCAATCTGCTGCCAACAATGGCATCCCACGACCCACTTCAAACCTCAACCAACTCATCTCCAGATTCAATTCTCTTGGACTTTCCACCAAGGACTTGGTCGCACTATCTGTTCTTTATGACTCGTTGTTACCTTGGCAACAGTCACGTAATGAATTTCATTTCATGTTAGGGGGTCATACAATTGGACAAGCAAGGTGCACAACCTTTAGAGCTCGCATCTACAATGAAACCAACATTGAAAGCTCCTTTGCCCGCATGAGACAATCTACTTGCCCTCGAAACTCAGGATCAGGGGACAACAACTTGGCACCCATTGACTTTGCCACTCCCACTTTCTTTGACAATCACTACTTCAAGAACCTTATTCAGAAAAAGGGCCTCATCCATTCTGATCAACAACTCTATAATGGTGGTTCCACTGACTCCATTGTGCATACCTACAGCGCCAATCCAGCTTCCTTTTTTGCTGATTTCTCAGCTGCTATGATCAAGATGGGAGACATCAGTCCCCTCACGGGCTCCCAGGGAGAAATAAGAAAGAACTGCAGGAGGGTGAACTAA 1026 0.463 MASSSCSTFVFGLALLVIVFSSANATLYTNFYSSSCPKLFDTVKREVESAISKETRMGASLLRLFFHDCFVNGCDGSILLDDTSSFTGEKNAGPNRNSARGFDVIDKIKSAVEKHCQGAVSCADILAIAARDSVHILGGPTWDVKLGRRDSKAASQSAANNGIPRPTSNLNQLISRFNSLGLSTKDLVALSVLYDSLLPWQQSRNEFHFMLGGHTIGQARCTTFRARIYNETNIESSFARMRQSTCPRNSGSGDNNLAPIDFATPTFFDNHYFKNLIQKKGLIHSDQQLYNGGSTDSIVHTYSANPASFFADFSAAMIKMGDISPLTGSQGEIRKNCRRVN 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00549 341 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst8g00549 341 PRINTS Plant peroxidase signature 275 292 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst8g00549 341 PRINTS Plant peroxidase signature 259 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst8g00549 341 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst8g00549 341 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst8g00549 341 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst8g00549 341 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst8g00549 341 PRINTS Plant peroxidase signature 315 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst8g00549 341 CDD secretory_peroxidase 27 340 IPR033905 GO:0004601|GO:0042744
Spst8g00549 341 FunFam Peroxidase 30 172 - -
Spst8g00549 341 Gene3D Peroxidase, domain 2 164 191 - -
Spst8g00549 341 Gene3D - 30 163 - -
Spst8g00549 341 Gene3D Peroxidase, domain 2 205 320 - -
Spst8g00549 341 Gene3D - 321 341 - -
Spst8g00549 341 FunFam Peroxidase 203 320 - -
Spst8g00549 341 SUPERFAMILY Heme-dependent peroxidases 27 341 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst8g00549 341 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Spst8g00549 341 Pfam Peroxidase 43 304 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst8g00549 341 ProSiteProfiles Plant heme peroxidase family profile. 26 341 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst8g00549 341 PANTHER PEROXIDASE 72-RELATED 24 340 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst8g00549 341 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst8g00549 341 PRINTS Haem peroxidase superfamily signature 206 221 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst8g00549 341 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst8g00549 341 PRINTS Haem peroxidase superfamily signature 261 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst8g00549 341 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00549 Spst-Chr8 5170248 5172206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00549 25 341 Peroxidase AT5G05340 69.085 6.67e-161 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00549 K00430 - gmx:100807421 557.37