Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00542 ATGTCGCCGGTGGCCGGAGCTCACGTCCCTCTCCTCCCAAATTCCAAGAGTGGTGGTCCACCGGCTACAGTTTTTGGTGCGGTGTTCAATGTTTCAAACAGCGTAATCGGTGCCGGGATAATGTCTCTTCCTGCTACCTTGAAGGTTCTGGGTGTGATCCCCGCGTTGGTACTGATTCTGGTTATTGCATTTCTGGCTGAACTATCGGTGGAGTTCTTGATGAGATTCACGCGTGCTGGCCAAACGACAACTTATGCGGGTGTGATGAGAGAGGCCTTTGGAGCCTTTGGAGCTGTAGCAGCTCAAATAGCTGTTGTAATTACTAATCTCGGGTGTTTAATTATGTACCTTATTATCGCTGCGGATGTGTTTTCTGGGAATAAACGTGAAGGGGAAGTACATTTTGGTGTTTTGCAACAGTGGTTTGGAATTCACTGGTGGAATTCAAGGGAGTTTGTGTTGGTAGTTATTTTGCTCTTAATTTTGCTTCCATTGGTCTTGTACCGTCGCGTAGAGTCGTTGAGGTTCAGTTCTGTAATATCAACTCTTCTTGCTGTGGCCTTCGTGACAACATGTACTGTGTTGGCAATTGTTGCTATTGTAGAAGGAAGAACACAGTCTCCTAAATTGATTCCTCGTTTGGACTACCACACCTCTTTCTTCGACCTGTTTACTGCAGTTCCAGTGATAGTCACAGCTTACACATTTCACTTTAATGTACATCCAATTGGGTTTGAGCTTTCCAATCCATCAGACATGACAACAGCAGTTCGATTAGCTTTACTACTTTGTGCTGTGATTTACTTTTCTATAGGCCTATTTGGGTACCTCTTGTTTGGAGATTCCACACAATCTGACATTCTCGTCAATTTTGACCAGAATGCTGGATCTACCCTTGGTTCTTTGCTCAATGTTTTAGTCCGATTAAGCTATGGATTTCATGTTATACTCACTTTTCCTCTCCTGAACTTCTCCTTGAGAACCAACATAGATGAATTCTTCTTCCCCAAGAAGCCTCTAATAGCCACAGACAGCAAGAGATTTGTGAGTCTCACTCTAGTGCTGCTAGTCTTGAGCTACATTGCTGCTATAGCAGTCCCAGATATTTGGTACATCTTTCAGTTTGTGGGATCAACATCTACAGTGTGTCTTGCGTTTGTCTTCCCTGGTGCTATTGTTCTAAGAGATTCCTACGGAATATCAACTAGAAGGGACAAAATCATTGCACTCTTCATGATCATACTAGCTGCAATAACAAGTGTAATTGCTATCTCCACCAACATATACAAAGCTTTTCAGTAG 1302 0.4324 MSPVAGAHVPLLPNSKSGGPPATVFGAVFNVSNSVIGAGIMSLPATLKVLGVIPALVLILVIAFLAELSVEFLMRFTRAGQTTTYAGVMREAFGAFGAVAAQIAVVITNLGCLIMYLIIAADVFSGNKREGEVHFGVLQQWFGIHWWNSREFVLVVILLLILLPLVLYRRVESLRFSSVISTLLAVAFVTTCTVLAIVAIVEGRTQSPKLIPRLDYHTSFFDLFTAVPVIVTAYTFHFNVHPIGFELSNPSDMTTAVRLALLLCAVIYFSIGLFGYLLFGDSTQSDILVNFDQNAGSTLGSLLNVLVRLSYGFHVILTFPLLNFSLRTNIDEFFFPKKPLIATDSKRFVSLTLVLLVLSYIAAIAVPDIWYIFQFVGSTSTVCLAFVFPGAIVLRDSYGISTRRDKIIALFMIILAAITSVIAISTNIYKAFQ 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00542 433 Gene3D Amino acid/polyamine transporter I 22 432 - -
Spst8g00542 433 PANTHER AMINO ACID TRANSPORTER 16 419 - -
Spst8g00542 433 Pfam Transmembrane amino acid transporter protein 22 422 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00542 Spst-Chr8 5128593 5130634 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00542 1 430 Amino Acid or Auxin Permease AAAP Family AT3G56200 57.773 1.21e-175 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00542 - - gmx:100800330 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00542 8 5128593 5130634 Spst8g00541 8 5124478 5128247 PCT