Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00541 ATGTCTGCGATACATATAAATCTGATTCTGCTCACTGCCTTTGTTTATGAAGGAGACGTACTGTGTGGAAATGAGTCGAACGGAACTATACACTTAGGTGTTCTACAAGAATGGTTTGGCATCAATTGGTGGACCTCTCGTGCTTTTTCCCTTCTTATTGTTGCCCTCTTCATAATGCTTCCACTCCTTATGTTACGACGTGTTGATTCACTAAGGTATAGTTCTGCAATATCGATCGTACTAGCATTGGTCTTTATTGCAATATGCTCTTCAATGGCGTTCAGTGCATTGTTGTCAGGCAAAACTCAATCACTAAGGCTAGTGCCTGATTTCTCTAAAGTCACTATCCTTGATCTTTTCACCACTGTCCCAATCTTTGTCACAGTTCATCCAATTAGAGCAGAGATTGGAAAAGTTACAGACATGGGTATGGCTGTGCGGATTTCCCTACTAATCTGCATGCTTGTTTACTTTTCGATTGGCTTCTTTGCGTACCTATTGTTTGGAGATTCCATCATGCCCGATGTGCTAGTAAACTTTGACCGAAACTCCAATACCCATGTTGGTCGATTGCTGAATGATGTTGTTAGAATAAGCTACGCACTCCATCTTGCACTTGTGTTCCCCATCATGAACTATTCCTTGAGGGTCAACATAGATGAACTGATTTTCTCAAACAAAAATAAGCGTCCCTTGGCTTCAGACACCCCAAGATTTGTGTCACTCACTTTGTCTTTGCTAGCCCTCACATACTTGGTGGCTGTGGCCATCCCAAACATTTGGAAGTAA 789 0.4195 MSAIHINLILLTAFVYEGDVLCGNESNGTIHLGVLQEWFGINWWTSRAFSLLIVALFIMLPLLMLRRVDSLRYSSAISIVLALVFIAICSSMAFSALLSGKTQSLRLVPDFSKVTILDLFTTVPIFVTVHPIRAEIGKVTDMGMAVRISLLICMLVYFSIGFFAYLLFGDSIMPDVLVNFDRNSNTHVGRLLNDVVRISYALHLALVFPIMNYSLRVNIDELIFSNKNKRPLASDTPRFVSLTLSLLALTYLVAVAIPNIWK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00541 262 PANTHER AMINO ACID TRANSPORTER 27 261 - -
Spst8g00541 262 Pfam Transmembrane amino acid transporter protein 41 260 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00541 Spst-Chr8 5124478 5128247 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00541 18 261 Amino Acid or Auxin Permease AAAP Family AT3G56200 49.603 2.26e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00541 - - gmx:100794031 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00541 8 5124478 5128247 Spst8g00541 8 5124478 5128247 ECH
Spst8g00541 8 5124478 5128247 Spst8g00541 8 5124478 5128247 PCT
Spst8g00542 8 5128593 5130634 Spst8g00541 8 5124478 5128247 PCT