Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00540 ATGAAGATTCCATCTCCCTCCAACATCACCGAAGCACTCGAGCCTCTCCTGTCGCCGGACTGCGAGCAATCGGCGGAGGATAGGAGTGCGCCGAATGGGTCAATCAGCGGAGCGGTGTTCAACATATCGACGACCATGATCGGCGCCGGAATCATGTCGGTTCCGGCGACGATGAAGGTGCTGGGGATAATTCCGGGGTTCTTGGTGATCGTTTTGGTGGCACTGATAACAGATGTTACCGTGGAGTTTATGCTGAGGTACACGATTTCCGGTAAATCCACTACTTACGCGGGCATGATGGGTGAATCGTTTGGGTCCGTAGGATCTTTAGCCGTTAAGATTTGCGTCCTCATAACCAATTTCGGAATCCTTATTATCTATCTCATTATTCTAGGTAACTTCCTCATCCTTCTTTTCGAGTTCTTATCTATGCATATTATTGTTATTAATTTTTTTTTTGGTACTCTGCGGTAA 474 0.4726 MKIPSPSNITEALEPLLSPDCEQSAEDRSAPNGSISGAVFNISTTMIGAGIMSVPATMKVLGIIPGFLVIVLVALITDVTVEFMLRYTISGKSTTYAGMMGESFGSVGSLAVKICVLITNFGILIIYLIILGNFLILLFEFLSMHIIVINFFFGTLR 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00540 157 Pfam Transmembrane amino acid transporter protein 33 144 IPR013057 -
Spst8g00540 157 PANTHER AMINO ACID TRANSPORTER 25 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00540 Spst-Chr8 5116902 5117375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00540 7 154 Amino Acid or Auxin Permease AAAP Family AT5G38820 42.568 1.79e-36 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00540 - - gmx:100794031 161.384