Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00531 ATGGAGAGCAAGAACCTCACCTCTAAATGTTTTTACCATAAACATTTTCAAAATGGGGTGAGGAATGCAGCACATAATCATTTTTTCCGCTTGTTTTTCTGTTTGTGGTTTATATTGGTGCCAGTGTTTGGTGAAGAGCGTTGGGATGGAGTTGTTGTGACACAGTCAAACTTCCTAGCACTTCAGGCATTCAAGCAAGAGTTGGTTGATCCCAAAGGCTTCTTGAAAAGCTGGAATGACAGTGGCTATGGAGCTTGTTCTGGAGGTTGGGTTGGTATCAAGTGTGCCCAGGGACAGGTTATTGTGATCCAGCTTCCATGGAAGGGGTTGCGGGGGCATATCACCGAGAGGATTGGCCAACTTCAGGGGCTAAGAAAGCTTAGTCTCCACGATAACCAAATTGGCGGTTCTATCCCTTCAGCACTGGGACTTCTTCTCAATCTAAGAGGGGTTCAACTCTTCAACAATAGGTTCACAGGGTCCATCCCTCCTTCATTAGGTTCCTGTCCTTTGCTTCAGTCTTTAGACCTCAGTAACAATTTGCTCGGTGGAACAATCCCAATGAGCCTTGGAAATGCCACTAAGCTTTATTGGCTTAACTTGAGCTATAATTCCTTCTCTGGCCCCGTACCAACTAGCCTAACTCGCTTAACTTCTCTCACCTACTTATCTCTTCAACACAATAATCTTTCAGGATCTATTCCAAACTCATGGGGTGGTAGCATGAGGAATCACTTCTTTCGGCTCCAAAATCTGATCCTAGATCATAACTTCTTGAGTGGAAGCATTCCTGCTTCTTTGGGCAACTTAAGTGAGCTCACAGAGATTTCTCTTAGTCATAACCAGCTTAGAGGAGCTATCCCAAATGAAATAGGAAGCCTTCCTAGACTTAATACAGTCGATTTTTCTAGTAATGCCTTGAATGGAAGCTTGCCTGCCACTCTCTCTAATGTATCCGCACTCACTCTCTTGAATGTAGAGAACAACCACCTTGGCAATCAAATCCCCGAAGCTTTAGGAAGATTGCACAATCTCTCTGTTCTAGTTCTGAGCAGAAACCAATTTAGTGGCCCCATTCCTCAAAGTATTGGAAACATTTCAAACCTTACACAGCTTGATTTGTCACTGAATAATCTCAGTGGAGAAATTCCAGCCTCCTTGGACGATCTGCGTAGTCTTAATTTCTTCAATGTTTCTCATAACAACCTCTCTGGTCCAGTTCCAACCCTACTTGCCCAAAAATTTAATTCGAGCTCATTTGTGGGAAATATTCAACTATGTGGGTATAGCCCTTCTACCCCATGTCCCTCGTCAGCTCCTTTTGGTTCACCTCCAAAAATATCAGAAGACCACCAGCACAAGAAACTAGGCACCAAAGACATAATTCTCATAGTAGCAGGAGTGCTCCTTGTAGTCCTGGTAACACTTTGCTGCATTCTGCTATTCTGCCTGATCAGAAAAAGAACAGCATCAAATGCAGAGGGTGGCCAGGCCACAGGGAGAGCATCTGCTGCCAGGACAGAAAAAGGAGTCCCTCCTGTCGCAGGTGAAGCTGAAGCGGGAGGTGGCGAGGCTGGAGGTAAACTAGTCCATTTTGACGGACCATTGGCTTTTACAGCTGATGACCTCTTGTGTGCAACGGCGGAGATAATGGGAAAGAGTACTTATGGAACTGTATACAAGGCTACATTAGAGGATGGAAGTCAAGCTGCAGTCAAACGATTGAGAGAAAAGATCACGAAAGGTCAAAGAGAATTCGAATCTGAAGTTAGTGTTATAGGAAGAATTCGACACCCAAATCTTTTGGCATTGAGAGCCTATTACTTGGGACCCAAAGGAGAAAAGCTTCTAGTATTTGATTACATGCCCAATGGAAGTCTTGCTTCTTTCCTACATGCTCGTGGGCCCGAAACAACCATTGATTGGCCAACAAGGATGAGAATAGCGCAGGGAATGGCTCGTGGTTTGTTATACCTTCATTCCAATGAGAACATTATACATGGGAACCTTACGTCCAGTAATGTGCTGCTGGATGAATATACGAATGCTAAAATAGCTGATTTTGGTCTTTCTCGGTTGATGACAACTGCTGCTAATTCTAACGTAATTGCCACCGCTGGAGCATTGGGATACCGAGCACCTGAGCTCTCTAAGCTTAAAAAAGCCAACACAAAAACTGATGTATACAGTCTTGGTGTCATCTTGTTAGAACTCCTAACGGGGAAGCCACCTGGTGAGGCTTTGAATGGCGTGGATTTACCTCAGTGGGTTGCCTCCATTGTCAAAGAGGAGTGGACAAATGAAGTTTTCGATGTAGAGTTGATGAGAGATGCTTCAACATATGGCGACGAGATGCTGAACACGTTGAAGCTTGTTTTGCATTGTGTTGATCCTTCTCCATCAGCACGACCAGAAATCCAGCAAGTCCTTCAGCAGCTTGAAGAGATTAGACCGGAGATATCCGCCAGTTCGGGCGACGATGGAGCCATCCCTTCGGCCAGTGAATGA 2508 0.4482 MESKNLTSKCFYHKHFQNGVRNAAHNHFFRLFFCLWFILVPVFGEERWDGVVVTQSNFLALQAFKQELVDPKGFLKSWNDSGYGACSGGWVGIKCAQGQVIVIQLPWKGLRGHITERIGQLQGLRKLSLHDNQIGGSIPSALGLLLNLRGVQLFNNRFTGSIPPSLGSCPLLQSLDLSNNLLGGTIPMSLGNATKLYWLNLSYNSFSGPVPTSLTRLTSLTYLSLQHNNLSGSIPNSWGGSMRNHFFRLQNLILDHNFLSGSIPASLGNLSELTEISLSHNQLRGAIPNEIGSLPRLNTVDFSSNALNGSLPATLSNVSALTLLNVENNHLGNQIPEALGRLHNLSVLVLSRNQFSGPIPQSIGNISNLTQLDLSLNNLSGEIPASLDDLRSLNFFNVSHNNLSGPVPTLLAQKFNSSSFVGNIQLCGYSPSTPCPSSAPFGSPPKISEDHQHKKLGTKDIILIVAGVLLVVLVTLCCILLFCLIRKRTASNAEGGQATGRASAARTEKGVPPVAGEAEAGGGEAGGKLVHFDGPLAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKGQREFESEVSVIGRIRHPNLLALRAYYLGPKGEKLLVFDYMPNGSLASFLHARGPETTIDWPTRMRIAQGMARGLLYLHSNENIIHGNLTSSNVLLDEYTNAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTGKPPGEALNGVDLPQWVASIVKEEWTNEVFDVELMRDASTYGDEMLNTLKLVLHCVDPSPSARPEIQQVLQQLEEIRPEISASSGDDGAIPSASE 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00531 835 SUPERFAMILY L domain-like 94 429 - -
Spst8g00531 835 Gene3D Ribonuclease Inhibitor 311 437 IPR032675 -
Spst8g00531 835 FunFam Leucine-rich repeat receptor-like protein kinase 530 621 - -
Spst8g00531 835 ProSiteProfiles Protein kinase domain profile. 545 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00531 835 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 244 439 - -
Spst8g00531 835 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 249 816 - -
Spst8g00531 835 FunFam Leucine-rich repeat receptor-like kinase 56 166 - -
Spst8g00531 835 Pfam Leucine rich repeat N-terminal domain 59 95 IPR013210 -
Spst8g00531 835 FunFam Leucine-rich repeat receptor protein kinase EMS1 167 243 - -
Spst8g00531 835 MobiDBLite consensus disorder prediction 495 522 - -
Spst8g00531 835 Gene3D Transferase(Phosphotransferase) domain 1 623 827 - -
Spst8g00531 835 SUPERFAMILY Protein kinase-like (PK-like) 549 817 IPR011009 -
Spst8g00531 835 Gene3D Ribonuclease Inhibitor 212 310 IPR032675 -
Spst8g00531 835 Gene3D Ribonuclease Inhibitor 55 211 IPR032675 -
Spst8g00531 835 Pfam Protein tyrosine and serine/threonine kinase 548 813 IPR001245 GO:0004672|GO:0006468
Spst8g00531 835 FunFam Pollen receptor-like kinase 1 622 826 - -
Spst8g00531 835 SMART LRR_typ_2 121 145 IPR003591 -
Spst8g00531 835 SMART LRR_typ_2 366 390 IPR003591 -
Spst8g00531 835 SMART LRR_typ_2 270 294 IPR003591 -
Spst8g00531 835 SMART LRR_typ_2 318 342 IPR003591 -
Spst8g00531 835 SMART LRR_typ_2 217 240 IPR003591 -
Spst8g00531 835 Gene3D Phosphorylase Kinase; domain 1 551 622 - -
Spst8g00531 835 CDD STKc_IRAK 551 816 - -
Spst8g00531 835 Pfam Leucine rich repeat 344 403 IPR001611 GO:0005515
Spst8g00531 835 Pfam Leucine rich repeat 171 230 IPR001611 GO:0005515
Spst8g00531 835 Pfam Leucine rich repeat 248 307 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00531 Spst-Chr8 5053715 5056293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00531 48 818 Receptor kinase-like Gene Family AT3G51740 64.865 0.0 964
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst8g00531 PK_Tyr_Ser-Thr 4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00531 - - gmx:100811174 1400.57