Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Spst8g00527 | ATGTGCAATGTCTTTACTCTTCTAACCAGCACAGCATCATTTGGATGCATAGAAGCTTACAACATTGCCTTGTTGGCTGTCACAATCATGTCGCACAGGAAGAGACGTTTAGATCAACTGAAGCATTCCATCAATGTTCACCCCTTTGAAGCAGTTGCCTTTGGCTCATGGCAAACTGTGGATTTCATAAAGATTGAGGCAGGAACTATGTCCATGCATTTTGTAGATAGTAACCATGTGGTGACTATGGAAAAAGGACCCTTCTCAGACATTAGGGTAAGGTCAAGGAAAGCTACTTTAACTGATTGCTCCCGTTTTCTGCGTCCTGGAGTTGACGTATGTGTGCTATCTGCCCCTCAACAATCTAATGATTCAGATGCAATTGTTATTGATCCAGTTTGGAGTGATGCTAAAATAAGCTCTGTACAAAGAAAACCTCATGACTCTGAGTGCTCGTGTCAATTTTTTGTCAATTTCTATGTTCATCAAGGTTCACTTGGTGCTGAGCTAAGAACTATTAGCAAGGAGATTAAAGTAGTTGGAATCAAACAAATATCCATCCTCCAGAAACTTGAAAATATTCCTTGTGAAGATCAGCACTATCGGTGGGCAACATCTGAGGACTGTTCCATTATATCACACACTAAATTGCTTCTTGGAAGAGTGTTATGTGATCTTTCATGGTTAGTCGTTGCATCAGTTTTAAAGAAGTTTTCATTCTGCGTAAGATCTTTAGAAGAAAAGCTAGTTTATCAAATTTTGGGAAGGGATACCGTGAGCACTTCATTGAACAAAGAGTCTCACATTGATGTTGTGAATTTCAGAACAGAAAATGGCATGTTAGTACCGATTGTTTCTCAAGTAGCTACACCTATTGATCATGTACAGGAGTCTCATGAAGAAAAATTATTACTATGCTATAATGTTGACGGCTTAAGGCGTTCCAAGCGCCGGAATGTACAACCAGAGCGTTACCTTGGTTGTGATAATGTTTCTGAGATTGATGTTGGTTCTTTCAGAAACAGACCACCAGTGAAAATAGACACATGGAAAGATGATGACGACGAGGACGAAGAACTACATATGCCATTAGCATACTTGTTTGGTTTGGACAAGAACTCTCTAAAAGGGGCTACTGAGAATCGTCAAAAGATTAAGAAGGTGAGTTCGTGCCGTGAGCTTGTGGTGTTCAAAACGAGGAAGGCTAAAAACCAGAAGGTAAAGTTAGGAGAAGATGATCAGAATGAACGTCAAAATCAACTTGCTATTATTCCTCTTCCTGATCAAGATGATCCACTACTCGTTGAACATTGTGATGATCTGGATGACAAGCTTACTAGAAGTTATGGTCATGATTCCCCTGAACGTTCTTCCAAATATTATCATCTAAGTAATATGACTGAATCAAAGAGGAAAGATAATAAATTGTTAAATTTTGAGCCTCATAACCATCCTGCAAATTCAGATGATGTAGAAAAGAGTGATGATTTGTCATCAAGATATCATTATAGTTATGGTGCCCCTAAGTCACAGAGGAAGAGTTTATGTGGTTTGGATGATATGGTGGATCTTGGAAATAAATGGGAAGGGATTAGATCCAATAAAGGAGTTAAAAGGAAAAAATATCATGCAGCATATTCAAGAAGTAGAGATCATGAAGAAGAAAAAAGATACAATTATAAAGACAGAACACTAAATGCAGCTGCCTACAAGGATTTGATAAACTCGTACTTGAAGAATATTAACACAAGACCGACACAAGAAGAACCATCTATCACTGACCAGTGGAAACAAAGCAACACAACTAGTAGCATTGGGCAAAATATGGAAACAGAAATACTTGGTGAAGAAGAGGATGCGGAAGAAGTATCTGAAATGGATATGTTGTGGAGAGAACTAGAAGTATCATTGGCATCGTGTTATCTAGAAGAGGATTCAAATGCTCCTGTTATCACTGAGGCTGTGGAAAAGCCAAATGAAGGCTGTCCACATGATTTCAGAATGAATGAAGAAATTGGAATCTACTGCTATAGATGTGGCTTCGTGAGCACTGAGATCAAATATATTACACCACCCTTTATTCAACATTCGGTATGGCACCAAGAGGAGAAGCACAATGCTGAAGAAGATTCACGAACAAAGGCTGATGAGGATGATGACTTGGATCTTTTCCCCACCCGAGATTCTCCCGAGGGACCTGTGTCTCAAGCAAGTGATAACGTTTGGGCATTGATTCCCGAACTTCGAACAAAGTTGCATGCCCATCAAAAGAAAGCCTTTGAGTTTCTTTGGCAAAACATTGCAGGTTCCATGGAACCCGGGCTTATGGAAGCAGCATCCAAAAGAAGAGGTGGCTGTGTGGTATCTCATACTCCTGGTGCGGGAAAAACTTTTCTCATTATTGCTTTTCTTGTTAGCTACTTGAAGTTATTCCCAGGAAAGAGGCCTCTAGTCCTTGCTCCAAAAACAACACTCTATACTTGGTACAAGGAATTTATCAAGTGGGATATTCCTATACCAGTGTATCTCATTCACGGTCGCAGAACCTACCGGGTATTCAAGCAGAAATCACCGGTTGTTCTTCCTGGAGTTCCCAAGCCCACTGATGATGTCAAGCATGTTTTGGATTGCCTTGAGAAGATACAAAAATGGCATTCACACCCCAGTGTTCTAATCATGGGTTATACTTCATTTTTAACATTGATGCGTGAGGATTCAAAGTTTGCACACAGAAAATACATGGCTAAAGTATTGAGGGAAAGCCCTGGAATCATGATACTGGATGAAGGGCACAATCCCCGAAGCACTAAATCAAGGTTGAGAAAGGTTTTGATGAAAGTACAGACAAAATTGAGAATACTGCTTTCTGGTACATTGTTTCAAAACAATTTCTGTGAATACTTCAACACTCTGTGTTTGGCAAGACCAAAGTTTATTCATGAAGTACTGAAAGCATTAGACCCGAAATACAGGAGGAAAGGAAAAGTGGCAAAAAAAGCAAGTCATTTATTAGAGTCACGGGCTAGAAAATTCTTCTTAGACAAAATTGCTAAGAAGATTGATTCAGGCAAAGGTAGGGAGAGACAGCAGGGTCTAAAGATGTTGAGAAATGTGACAAATGGTTTCATAGATGTTTATGAAGGTGGGAGTTCTGATGGTCTACCTGGTTTACAAATTTATACGTTGCTAATGAATTCAACTGATACACAACATGAGATTTTGCTTAAACTGCACAAGAAAATGGCCGAGTGCAATGGTTACCCTCTGGAGCTGGAGCTTTTGATAACTCTTGGGTCAATACATCCTTGGTTGGTCAAAACAGCAGTATGTGCTGAGAAGTTTTTTACTACTGAGCAATTGATGGATCTAGAAAAATGCAAATTTGATCTAAAAATAGGATCCAAAGTAAGATTTGTTTTGAGTCTTGTGTACCGTGTTGTAAAGAAGGAGAAAGTTCTTATATTTTGTCACAATATTGCACCTGTCAAGTTATTCCTGGAATATTTTGAGAAGTACTTTGGATGGCAAAGAGGTAAGGAAGTGTTGGTACTAACTGGCGAACTAGAGCTCTTTGAAAGAGGAAGGGTAATGGATAAGTTTGACGAGCCTGGCGGAGTAGCAAAGATACTCCTAGCTTCTATTACAGCTTGTGCTGAAGGCATTAGTTTGACAGCAGCTTCTCGGGTGATTATGTTGGATTCAGAGTGGAACCCTTCAAAAACTAAGCAAGCCATTGCTCGTGCCTTTCGTCCTGGTCAGCAGAAGGTTGTTTATGTGTATCAGCTCTTGGTGACAGGTTCATTGGAGGAAGATAAGTACCGAAGAACCACTTGGAAAGAGTGGGTGTCAAGCATGATATTCAGTGAGGCCTTTGTGGAGGACCCTTCTCAGTGGCAAGCTGAGAAGATTGAAGATGATATACTCAGGGAAATGGTTGCGGAGGACAGGTCTAAATCGTTCCATATGATCATGAAGAATGAAAAAGCTTCTTCTACCAACAAATAA | 4005 | 0.3985 | MCNVFTLLTSTASFGCIEAYNIALLAVTIMSHRKRRLDQLKHSINVHPFEAVAFGSWQTVDFIKIEAGTMSMHFVDSNHVVTMEKGPFSDIRVRSRKATLTDCSRFLRPGVDVCVLSAPQQSNDSDAIVIDPVWSDAKISSVQRKPHDSECSCQFFVNFYVHQGSLGAELRTISKEIKVVGIKQISILQKLENIPCEDQHYRWATSEDCSIISHTKLLLGRVLCDLSWLVVASVLKKFSFCVRSLEEKLVYQILGRDTVSTSLNKESHIDVVNFRTENGMLVPIVSQVATPIDHVQESHEEKLLLCYNVDGLRRSKRRNVQPERYLGCDNVSEIDVGSFRNRPPVKIDTWKDDDDEDEELHMPLAYLFGLDKNSLKGATENRQKIKKVSSCRELVVFKTRKAKNQKVKLGEDDQNERQNQLAIIPLPDQDDPLLVEHCDDLDDKLTRSYGHDSPERSSKYYHLSNMTESKRKDNKLLNFEPHNHPANSDDVEKSDDLSSRYHYSYGAPKSQRKSLCGLDDMVDLGNKWEGIRSNKGVKRKKYHAAYSRSRDHEEEKRYNYKDRTLNAAAYKDLINSYLKNINTRPTQEEPSITDQWKQSNTTSSIGQNMETEILGEEEDAEEVSEMDMLWRELEVSLASCYLEEDSNAPVITEAVEKPNEGCPHDFRMNEEIGIYCYRCGFVSTEIKYITPPFIQHSVWHQEEKHNAEEDSRTKADEDDDLDLFPTRDSPEGPVSQASDNVWALIPELRTKLHAHQKKAFEFLWQNIAGSMEPGLMEAASKRRGGCVVSHTPGAGKTFLIIAFLVSYLKLFPGKRPLVLAPKTTLYTWYKEFIKWDIPIPVYLIHGRRTYRVFKQKSPVVLPGVPKPTDDVKHVLDCLEKIQKWHSHPSVLIMGYTSFLTLMREDSKFAHRKYMAKVLRESPGIMILDEGHNPRSTKSRLRKVLMKVQTKLRILLSGTLFQNNFCEYFNTLCLARPKFIHEVLKALDPKYRRKGKVAKKASHLLESRARKFFLDKIAKKIDSGKGRERQQGLKMLRNVTNGFIDVYEGGSSDGLPGLQIYTLLMNSTDTQHEILLKLHKKMAECNGYPLELELLITLGSIHPWLVKTAVCAEKFFTTEQLMDLEKCKFDLKIGSKVRFVLSLVYRVVKKEKVLIFCHNIAPVKLFLEYFEKYFGWQRGKEVLVLTGELELFERGRVMDKFDEPGGVAKILLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLVTGSLEEDKYRRTTWKEWVSSMIFSEAFVEDPSQWQAEKIEDDILREMVAEDRSKSFHMIMKNEKASSTNK | 1334 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Spst8g00527 | 1334 | PANTHER | SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED | 82 | 1330 | IPR044567 | GO:0080188 | |
| Spst8g00527 | 1334 | Pfam | SNF2-related domain | 763 | 1019 | IPR000330 | GO:0005524|GO:0140658 | |
| Spst8g00527 | 1334 | SMART | helicmild6 | 1163 | 1252 | IPR001650 | - | |
| Spst8g00527 | 1334 | Gene3D | - | 732 | 1018 | IPR038718 | - | |
| Spst8g00527 | 1334 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 1139 | 1299 | IPR001650 | - | |
| Spst8g00527 | 1334 | MobiDBLite | consensus disorder prediction | 445 | 467 | - | - | |
| Spst8g00527 | 1334 | MobiDBLite | consensus disorder prediction | 701 | 721 | - | - | |
| Spst8g00527 | 1334 | Gene3D | - | 1108 | 1326 | IPR027417 | - | |
| Spst8g00527 | 1334 | CDD | DEXHc_ATRX-like | 752 | 982 | - | - | |
| Spst8g00527 | 1334 | CDD | SF2_C_SNF | 1127 | 1263 | - | - |
Showing 1 to 10 of 16 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Spst8g00527 | K10875 | - | gmx:100811703 | 2220.66 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Spst8g00527 | 8 | 5001279 | 5006830 | Spst8g00527 | 8 | 5001279 | 5006830 | ECH | |
| Spst8g00527 | 8 | 5001279 | 5006830 | Spst8g00527 | 8 | 5001279 | 5006830 | PCT |
Showing 1 to 2 of 2 entries