Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00505 ATGTCGATTCACGATTCCGAAGCCTTCAATTGGCACTACGACACGGAGCTCGACGACCAGACCCTCGAAATCCGCGGTCGAAAGCTCTTCTTCATCATCGTTGTCTTCTCCGTCATCCTCCTCTTCACCGCGCTCTTCGTCTTCGCACGCCGGATCTGTAGCCACCATGGCCTCCCCTTCGACTCCCACCCGCCGCATAACCCGACGCCGACGCTTCCACCGCAGGACGGCCTCGATGCCGCTGCAATCAAACGCCTGCCGATCATCCTGCATCAGCGCGCGGCAGCGGAGGAGACCGAGTGCTGCATCTGCCTCGGCATGTTCGTCGACGGCGCGAAGCTGAAGGTTCTCCCTGGATGCGAGCACAGTTTCCACAGCGAGTGCGTGGATAAGTGGCTAGCTGATCACTCCAATTGTCCTCTCTGTAGAGCTTCGCTGAAACTCGATCCTGCGTTTCCGAGGATTTTGATCCAAGCGCCACCTGTTAGAACCACTCTTCCTCTCTAA 507 0.5799 MSIHDSEAFNWHYDTELDDQTLEIRGRKLFFIIVVFSVILLFTALFVFARRICSHHGLPFDSHPPHNPTPTLPPQDGLDAAAIKRLPIILHQRAAAEETECCICLGMFVDGAKLKVLPGCEHSFHSECVDKWLADHSNCPLCRASLKLDPAFPRILIQAPPVRTTLPL 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00505 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 148 IPR013083 -
Spst8g00505 168 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
Spst8g00505 168 Pfam Ring finger domain 100 143 IPR001841 -
Spst8g00505 168 SUPERFAMILY RING/U-box 88 149 - -
Spst8g00505 168 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 29 146 IPR044675 -
Spst8g00505 168 SMART ring_2 101 142 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00505 Spst-Chr8 4791298 4791804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00505 11 151 C3H Transcription Factor Family AT3G11110 44.898 3.49e-32 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00505 - - gmx:100794554 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00505 8 4791298 4791804 Spst8g00505 8 4791298 4791804 PCT