Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00493 ATGACATTCAAGCGTAGGAATGGAGGTCGCAACAAGCACGGTCGCGGCCACGTCAAATTCATTCGTTGCTCTAACTGCGGCAAATGCTGCCCTAAGGACAAGGCAATCAAGAGGTTTCTCGTGAGGAACATTGTGGAGCAGGCTGCAGTCAGAGATGTTCAGGAGGCTTGTGTCTATGAACAATACACGCTTCCCAAACTGTATGTGAAGATGCAGTACTGTGTTTCGTGTGCTATCCACTCTCATGTGGTTAGGGTTCGATCCCGCACTGACAGGAGGAAGCGTGACCCTCCACAGCGATTCATCAGGCGCAGGGATGATGCACCTAGGCCTGGTCAGCCCGGTCAAGCGCCTCGTCCTGCCGGGGTTGGAGCTCCTGTCCGAGCCTAA 390 0.541 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRRRDDAPRPGQPGQAPRPAGVGAPVRA 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00493 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 122 IPR000892 GO:0003735|GO:0005840|GO:0006412
Spst8g00493 129 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Spst8g00493 129 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Spst8g00493 129 MobiDBLite consensus disorder prediction 86 129 - -
Spst8g00493 129 FunFam 40S ribosomal protein S26 1 114 - -
Spst8g00493 129 MobiDBLite consensus disorder prediction 90 110 - -
Spst8g00493 129 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00493 Spst-Chr8 4654497 4656067 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00493 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 84.483 8.22e-70 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00493 K02976 - gmx:100781822 213.772