Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00488 ATGGCTGTGTCCAACGGCGTCGAAGCAGTGTTAGAGTTTCTACGGAAGAATGGCTTGTCGGAAGCGGAGTCCGCGCTCCGAGAAGACATCATCGAGAACACCGACCTCGGAAACTTCGACTACGAGAAGTTCTTCTTCCCTATGGTCCCGCCGCCGCCGCCGGTCAGAGTCCGATCCTTCTCCCGGCCGTCCGAGCTCGCCGCCTCGGACGACGACTGCTCCAAATCCAGCTGCGACGAGTTCGTCACCATCGGTTCTTCCACTTCTCGTGTCTCTTCTTCAGAATTCGTAAATCCATATGGAATCCGTTCCTCCTCTCAGACTCAGAATGATTCCGAGTCTTCTTCTGAAAGATTATCTCAGTTTGGCACCGCACGTGATTATCACGATTTTGATATGCAAAACGAACCGTATTGGTACAATGAAAAAGATGATGACTATTTCATGACTCCTAGTTTTGAAGGGCCCGATTTCTTTGCGTGTCAGAGTGAAGATAAGTTTGTCATGACAGCAGAAACGGAAAAGCAACGTGACAATTCTCTGCACCTTGGCTACAACCATGAAGAATTTCAACTAAAGGGGAATAGTAATGGTGATTACATGGACAAGACATGCCTCTATAATCATTCCTCTGTAGGAGATGGAACTGTGAATTATTCAAAAGGGTATTGCCATGTTGATAACGAGGACCGGTTTGAAGGGGAATTAGAGAGCAAGGCTGAGAAACGCACTGTTGCTTGTAGTTGTGAAGTTCCATTTTGCAAAAGCAGTCCTGGTTCGGGAGGTTCTTGCAGTTTGGATCCTACAAACTTCGGCTACCCTAACTTGAAGGAAATCCATCTGAACGATTTTCATTTGAAGGTTGTTGGGGACATTAACTCTTTTGATTCTACTTCAAAGCTAACTCTGAATCAAAGTTTTGACTGCTATACTAAAACCGATCACAATAAGAAGTACAAGGGTCCCTATGACTTAACTATCAAAGTTAAGGATAAAAATATACCAAATGGACATGACACCTATGAAGCACAAATTGGTGGAGAATTAGCTGAAGACTGCCAAGATCCAGAACTAGCTGCAGATGGAGAGGATACAACTGATGATGAGCTCTTGAAGTATACTCAAGAGGAAGAATACGAAGTATTTGATCTGAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAACAAGGAACTTCCCATTGTGCTAAATACAGTCTTGGCTGGAAGGTATTATGTAACAGAGTATCTTGGTTCAGCTGCCTTCAGTAGGGTTGTTCAGGCACATGATCTTCAGACAGGAATAGATGTTTGTTTGAAGATTATTAAAAATGACAAAGACTTTTTTGATCAAAGCTTAGATGAAATCAAGCTTCTGAAACTTGTCAATAAGCATGATCCAGCAGACAAACATCACATTTTGCGCCTTTATGACTATTTCTATCATCAGGAGCATTTATTCATTGTAACTGAACTTCTTCGAGCAAACTTGTATGAATTTCAAAAATTCAACCAAGAATCTGGAGGGGAAGCATATTTTACACTAAAGAGATTGCAGTTCATTACTCGTCAGTGCTTGGAAGCATTGCAATACTTGCATAGCTTGGGAATTGTTCACTGTGACCTGAAGCCGGAAAACATTTTAATCAAAAGTTACAAAAGATGTGAAATAAAGGTTATTGATCTTGGAAGTAGTTGCTTCCAAACAGACAATCTGTGCCTATATGTACAGTCCAGATCCTATAGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGATGAAAAGATTGATATATGGTCTCTTGGCTGCATCTTGGCAGAACTATGCTCTGGTGAAGTGTTGTTTCCTAATGATGCAGTTGTGATGATCCTGGCACGCATAATTGGAATGTTTGGTTCTATTGATATGGAAATGTTGGTGAAAGGACAAGAAACTCACAAGTACTTCACTAAAGAATATGATATTTATTATGTAAATGAGGAGACTGATCAACTGGAGTACTTAATTCCAGAAGAGTCAACGTTGGAGCAGCACCTACAGGTTACTGATACTATGTTCATCAACTTTCTCAGATACTTACTCTGCATCAACCCCAAAAGAAGGCCTACTGCCAGACAGGCACTAAAGCATCCATGGCTTTCCTTTGTTTACTAG 2160 0.4139 MAVSNGVEAVLEFLRKNGLSEAESALREDIIENTDLGNFDYEKFFFPMVPPPPPVRVRSFSRPSELAASDDDCSKSSCDEFVTIGSSTSRVSSSEFVNPYGIRSSSQTQNDSESSSERLSQFGTARDYHDFDMQNEPYWYNEKDDDYFMTPSFEGPDFFACQSEDKFVMTAETEKQRDNSLHLGYNHEEFQLKGNSNGDYMDKTCLYNHSSVGDGTVNYSKGYCHVDNEDRFEGELESKAEKRTVACSCEVPFCKSSPGSGGSCSLDPTNFGYPNLKEIHLNDFHLKVVGDINSFDSTSKLTLNQSFDCYTKTDHNKKYKGPYDLTIKVKDKNIPNGHDTYEAQIGGELAEDCQDPELAADGEDTTDDELLKYTQEEEYEVFDLRIIHRKNRTGFEENKELPIVLNTVLAGRYYVTEYLGSAAFSRVVQAHDLQTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADKHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTLKRLQFITRQCLEALQYLHSLGIVHCDLKPENILIKSYKRCEIKVIDLGSSCFQTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARIIGMFGSIDMEMLVKGQETHKYFTKEYDIYYVNEETDQLEYLIPEESTLEQHLQVTDTMFINFLRYLLCINPKRRPTARQALKHPWLSFVY 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00488 719 FunFam Putative serine/threonine-protein kinase dyrk2 407 494 - -
Spst8g00488 719 FunFam Serine/threonine-protein kinase ppk15 492 716 - -
Spst8g00488 719 CDD PKc_DYRK_like 413 715 - -
Spst8g00488 719 SMART serkin_6 413 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00488 719 Gene3D Transferase(Phosphotransferase) domain 1 467 715 - -
Spst8g00488 719 PANTHER DUAL SPECIFICITY PROTEIN KINASE 108 715 - -
Spst8g00488 719 MobiDBLite consensus disorder prediction 100 121 - -
Spst8g00488 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Spst8g00488 719 Gene3D Phosphorylase Kinase; domain 1 408 494 - -
Spst8g00488 719 ProSiteProfiles Protein kinase domain profile. 413 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00488 719 SUPERFAMILY Protein kinase-like (PK-like) 402 716 IPR011009 -
Spst8g00488 719 Pfam Protein kinase domain 415 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00488 Spst-Chr8 4581439 4586450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00488 410 710 MAP Kinase Gene Family AT5G19010 31.776 1.47e-34 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Spst8g00488 Pkinase 1.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00488 - - gmx:100783988 1268.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00488 8 4581439 4586450 Spst8g00488 8 4581439 4586450 ECH