Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00486 ATGAAGAATAGTTCACCCTTCGCCGCCGTTACCTTCACTCTCTTCGCTGCCACCCTCTTAATCCTCTCTTCACTGTCACCGTCCCAGGCCATCGGTTCCGCTTCCACCCTCGCCGTTACCTCCGCCGCCGTATGCGGCGTGGTGGCATCGGAGCCGACGCGGCGCATTGCTTGCTACCGCGACGGCCACGTCGTCCCCATCGCCCCCATCATCTCGTTCTCCGCGATCTCCGGCGGCTTGAGCTACTTCTGCGGCCTACGGTCCGGTAACTATAGTCTTCTCTGCTGGGACACCCTTTCCTACTTTCAAAGCAAGAGACTTTACAACAATGTCACTGTTCTATTCGAGAATCTCGCCGTCGGGGACTCCCCGGTTTGCGCAACCGCGGTCGACGACGGAACAGTGTCGTGTTGGAGAATCAATGCCGCCTTCAAATTGCCTTCTGAGTCGGACCGTTTTTCTTCTATTTCATCTGGGTCGGGTTTTTCTTGCGGAATTTTGAAGGGTAGTGGTTGGGTTCGGTGTTGGGGGGTTGAGTCTGTGGCGAGAAAAATGGAGAGTGAGTTTGGGAACGTGTCTATGGTGAGTCTTGTGGCTGGGGAGTCACATGTCTGTGGGTTGAATTCAAGTGGGTATTTGGTTTGTAGAGGAAGTAACGATTTTGGTCAAATTGATGTTCCTGAAGGAGGAGCTTTGGAGTTTTCTGGTTTGGCGCTTGGAGGTGAGCATAGTTGTGCTATTCGGAGATCCAATGGTTCCGTCGTTTGTTGGGGTGGGAGAGGGTTGTTTGAGGTTAATGTTACAAAAGGTGTTTCTTTTGAGGTTCTTGTTTCTGGGTCCAATTTTACCTGTGGATTGACGACTAACAATTTTTCAGTTATTTGTTGGGGTCCTGGTTGGGCTAATGGTTCAGGTTATGAGGTTCCTTTGCCCCCTATTCTTCCAGGGCCTTGTGTTCAATCTTCTTGCAGTGAATGTGGGATATATCCTCAATCTGAGTCTCTGTGTTCCGGCTTTGGTAACATCTGTAAGCCAAGACCTTGTTGGCCTCAAATGCCAGGGCCAGCGCCACCACAAATGGCACCGCCGCCTGCGGTAGCGCTGCCACCTGCTTCTCAGCCAAGAGCCTTGACAAAAGGGTTATTGGCGTTTGCCATTGTTGGATCCGTGGGAGTTGTTGCTGGGATATGCACTGTGATTTATTGCTTGTGGACTGGGGTTTGTTTAGGGAAGAAAAAAATTCACAATTCTGTGCAGCCAACAATAACTAGAGGTGGCAGTGTAAACGGTGGGGGTGGTTCTAACAATAGTATTAGTCCTCCTTCGAGATCATCCACCATTAGGCGTCAAGGGTCGCGGATAATGAGGCGCCAAAGGAGTGGAACCTCATCAACAAAGCATCCTGAGAGGGCTGAGGAATTCTCCTTGGCTGAGCTTGTTGCAGCTACGGATAATTTCTCCCTTGAGAACAAGATTGGTGCTGGAAGCTATGGCGTCGTTTATAGAGGCAAACTTGCGGATGGCCGTGAGGTGGCAATCAAAAGGGGTGAAACGGGTACCAAGATGAAGAAGTTTCAAGAGAAAGAGAGTGCATTTGAGTCAGAATTGGCCTTCTTGTCCCGTTTACACCACAAGCACTTGGTAAGGCTGGTGGGGTTCTGTGAAGAGAACGATGAGAGGCTCTTGGTGTATGAGTACATGAAGAATGGGGCATTGTATGATCATTTGCATGACAAAAACAATGTGGACAAGAGTAGCAGTGTCTTGAATTGTTGGCGAATGAGGATCAAAATAGCCCTGGATGCTTCGCGAGGAATTGAATATCTCCATAACTATGCAGTTCCATCTATAATTCACAGAGATATAAAGTCATCCAACATTCTCATTGACGCGACTTGGACGGCTAGAGTATCCGATTTTGGATTGTCATTGATGAGTCCAGAATCTGACCTTGATTACCGGCCAACGAAGGCAGCAGGGACAGTTGGATACATTGATCCGGAATATTATGGTCTAAATGTATTGACTGCAAAGAGTGATGTCTATGGGCTTGGAGTGGTACTGCTAGAACTATTAACGGGAAAGAGAGCTATATTCAAGAATGATGAAAATGGAGGCACCCCAGTGAGTTTGGTAGACTTTGCAGTGCCAGTTATTATGGCAGGAGAATTGGCAAAAATTTTGGACCCAAGGGTTGAACCACCAGCTTTGAATGAGACAGAAGCAGTGGAGTTAGTGGCATATACAGCTATGCATTGTGTAAATTTGGAGGGGAAGGACCGACCAACAATGGCTGATATTGTGGCAAATTTGGAGCGTGCTTTGGCTCTTTGTGATAGTAGTCATGGCAGCATTTCCAGTGGTACAGTCTCCATTGTATCAGACTGA 2388 0.4832 MKNSSPFAAVTFTLFAATLLILSSLSPSQAIGSASTLAVTSAAVCGVVASEPTRRIACYRDGHVVPIAPIISFSAISGGLSYFCGLRSGNYSLLCWDTLSYFQSKRLYNNVTVLFENLAVGDSPVCATAVDDGTVSCWRINAAFKLPSESDRFSSISSGSGFSCGILKGSGWVRCWGVESVARKMESEFGNVSMVSLVAGESHVCGLNSSGYLVCRGSNDFGQIDVPEGGALEFSGLALGGEHSCAIRRSNGSVVCWGGRGLFEVNVTKGVSFEVLVSGSNFTCGLTTNNFSVICWGPGWANGSGYEVPLPPILPGPCVQSSCSECGIYPQSESLCSGFGNICKPRPCWPQMPGPAPPQMAPPPAVALPPASQPRALTKGLLAFAIVGSVGVVAGICTVIYCLWTGVCLGKKKIHNSVQPTITRGGSVNGGGGSNNSISPPSRSSTIRRQGSRIMRRQRSGTSSTKHPERAEEFSLAELVAATDNFSLENKIGAGSYGVVYRGKLADGREVAIKRGETGTKMKKFQEKESAFESELAFLSRLHHKHLVRLVGFCEENDERLLVYEYMKNGALYDHLHDKNNVDKSSSVLNCWRMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILIDATWTARVSDFGLSLMSPESDLDYRPTKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKNDENGGTPVSLVDFAVPVIMAGELAKILDPRVEPPALNETEAVELVAYTAMHCVNLEGKDRPTMADIVANLERALALCDSSHGSISSGTVSIVSD 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00486 795 FunFam Serine/threonine-protein kinase-like protein CCR4 567 789 - -
Spst8g00486 795 SUPERFAMILY RCC1/BLIP-II 64 299 IPR009091 -
Spst8g00486 795 Gene3D Phosphorylase Kinase; domain 1 447 566 - -
Spst8g00486 795 Gene3D - 183 311 IPR009091 -
Spst8g00486 795 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 191 781 IPR044815 GO:0004674
Spst8g00486 795 SMART serkin_6 486 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00486 795 Pfam Regulator of chromosome condensation (RCC1) repeat 195 223 - -
Spst8g00486 795 Gene3D - 30 182 IPR009091 -
Spst8g00486 795 Gene3D Transferase(Phosphotransferase) domain 1 567 784 - -
Spst8g00486 795 ProSitePatterns Protein kinases ATP-binding region signature. 492 514 IPR017441 GO:0005524
Spst8g00486 795 MobiDBLite consensus disorder prediction 421 471 - -
Spst8g00486 795 ProSiteProfiles Protein kinase domain profile. 486 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00486 795 FunFam serine/threonine-protein kinase-like protein CCR1 455 566 - -
Spst8g00486 795 SUPERFAMILY Protein kinase-like (PK-like) 464 771 IPR011009 -
Spst8g00486 795 Pfam Protein kinase domain 487 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00486 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Spst8g00486 795 MobiDBLite consensus disorder prediction 421 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00486 Spst-Chr8 4560384 4562771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00486 3 795 Receptor kinase-like Gene Family AT3G55950 60.341 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Spst8g00486 Pkinase 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00486 - - gmx:100798905 1276.15