Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00477 ATGTTGGTGAAGTTTGGGAGCACATGTGATACACCATACAACATAAGTAACATTCGTATATATACAGATAGGAACACACACGATCAGTTCCATCACTTTCTTACTATTACTTCAATGGCATCTTTCATAACAACACCACTCATCCTTCTCTTCATCTCCGCCCTCTTCCTCTTCGTCCACCGCCGATCCCGCTATCGCCGCCTCCACCTCCGCCTCCCGCCGGGCACCCTCGGCCTCCCCTTCGCCGGCGAGACCCTCCAGCTCATATCAGCCTACAAGACCGACAACCCCGAACCCTTCATCGACCACCGCGTCCACCGCTACGGTCCAATCTTCACCACACACGTCTTCGGTGAACCCACAGTCTTCTCCGCCGACCCGGAGACGAACCGGTTCATTCTGCTCAACGAAGGGAAACTCTTTGAATGTAGCTACCCCGGTTCCATATCGAACCTCCTCGGAAAACACTCTCTGCTTCTCATGAAGGGCTCTCTTCACAAGAGAATGCACTCCCTCACCATGAGTTTCGCCAACTCTCCCATCATCAAGGATCATTTGCTGGTTGACATAGACCGTCTCATCCGGCTCAACCTCGATTCCTGGTCCGACCGGGTTCTTCTCATGGAAGAAGCCAAAAAGATAACGTTTGAGTTGACAGTGAAGCAGTTGATGAGCTTTGATCCAGGTGAATGGACTGAGACTCTTAGAAAAGAGTACGTTCTTGTGATCGAAGGATTTTTCACTCTTCCATTGCCTCTCTTTTCAACCACCTACCGCAGAGCCATCAAGGCTAGGACAAAGGTGGCAGAGGCATTAACGTTGATAGTGAGGGAGAGAAGAAAAGAAAGCGTAAAGGAGGAGAGAAAGAATGACATGCTAGGAGCATTGTTGGCCTCCAGCAACCACTTTTCCGACGAGGAAATAGTGGATTTTATGTTGGCTTTGCTCGTCGCCGGTTATGAAACCACCTCCACCATAATGACTCTTGCCGTCAAATTCCTCACCGAGACTCCTCTGGCATTGGCACAACTCAAGGAAGAGCATGATCAAATCAGAGCCAAGAAGGGTCATCCAGAGGAACCACTGGAGTGGACAGATTACAAGTCAATGGCATTTACTCAATGTGTTGTGAATGAGACTTTGAGGGTGGCAAACATAATTGGTGGGATATTTAGAAGAGCAATGAGAGACATAAACATTAAAGGTTACACTATCCCAAAGGGATGGAGGGTCTTTGCTTCATTTCGTGCTGTACATCTAAACCCTGATCATTACAAAGATGCGCGCACCTTCAATCCATGGAGATGGCAGAGTAACTCTGAAGCAACTAGCCCTGGGAATGTATATACCCCATTTGGAGGAGGGCCACGTCTTTGCCCTGGTTATGAGCTTGCCAGAGTTGTACTCTCTATCTTCCTTCACCGCATTGACGCAGAAGAGGTATCCTATCATAGTGAAGCGCAGAGAGGTGTCCAGACCAAGTAA 1485 0.4869 MLVKFGSTCDTPYNISNIRIYTDRNTHDQFHHFLTITSMASFITTPLILLFISALFLFVHRRSRYRRLHLRLPPGTLGLPFAGETLQLISAYKTDNPEPFIDHRVHRYGPIFTTHVFGEPTVFSADPETNRFILLNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSPIIKDHLLVDIDRLIRLNLDSWSDRVLLMEEAKKITFELTVKQLMSFDPGEWTETLRKEYVLVIEGFFTLPLPLFSTTYRRAIKARTKVAEALTLIVRERRKESVKEERKNDMLGALLASSNHFSDEEIVDFMLALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDQIRAKKGHPEEPLEWTDYKSMAFTQCVVNETLRVANIIGGIFRRAMRDINIKGYTIPKGWRVFASFRAVHLNPDHYKDARTFNPWRWQSNSEATSPGNVYTPFGGGPRLCPGYELARVVLSIFLHRIDAEEVSYHSEAQRGVQTK 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00477 494 Gene3D Cytochrome P450 62 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00477 494 SUPERFAMILY Cytochrome P450 64 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00477 494 FunFam Cytochrome P450 90A1 60 491 - -
Spst8g00477 494 PRINTS E-class P450 group I signature 105 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00477 494 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00477 494 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00477 494 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00477 494 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00477 494 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00477 494 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00477 494 CDD CYP90-like 104 476 - -
Spst8g00477 494 PANTHER CYTOCHROME P450 26 68 476 - -
Spst8g00477 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Spst8g00477 494 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00477 494 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00477 494 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00477 494 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00477 494 Pfam Cytochrome P450 249 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00477 Spst-Chr8 4506142 4511484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00477 161 476 Cytochrome P450 AT5G05690 80.757 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00477 K09588 - gmx:100775886 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00477 8 4506142 4511484 Spst8g00477 8 4506142 4511484 ECH
Spst8g00477 8 4506142 4511484 Spst8g00477 8 4506142 4511484 PCT