Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00466 ATGCCCCTCCTCCGATCTTCTTCAGAGTCTCCGACAGTAACCGGAACTCCGACGTGCGGTCACGGTAAGAGTAAGCCATCGGAGACACGTCCGTTCACCATTGGGCTAATATTTCACACCGAGGCCCAATCTGTGACTCATTTCAGATCTCCTTTTCTTTACAGCGCGCCGCACCACAGCCTCCTCAACGTGGCCGACCACCGTTCTTCTTCTTCATCCTCCTCAGCAGCAATGGCGGGAAAATTGGCAAAAGCAGCTTATGATGCAAAGATGTCGAAGCTTCTGAGAGAGTACAGTCAAGTACTGGTGATTTCTTCGGACAATGTGGGTTCCAACCAGTTTCAGGGCATAAGGAGGGGACTCCATGCCGATTCAGTGGTGGTGATGGGAAAGAACTCCATGATGAAACGTTCTATCATCTTGGATGCTGAGAAGACAGGCAACAAGTCCTTCCTTAACCTTGTCCCCCTTCTTGTGGGAAATGTGGCATTAATTTTCACCAAAGGTGACTTGAGAGAGGTTAGCGAACAGATTGCCAAGCACAAGGTTGTTCAACCTATTCTAATGTGCCCCAAGTATACGTCATATGACACATATCACAATTGTTCCTATATGCAATCCGGACAGATACCTTTGGGTCTCACGTGTTGTAATCCGCAGTCTTCGCAGGTTTCTGAGCCTTTTCTTGTATGCTCAAAATTCATGCCACACCAACATTGTTTCTTGATGAGATCAAGACAGTTCTTGATGACGAGTATATGGTCTCCTCTTCTTCTTTTGGCTGGCAACTTGTAA 795 0.4717 MPLLRSSSESPTVTGTPTCGHGKSKPSETRPFTIGLIFHTEAQSVTHFRSPFLYSAPHHSLLNVADHRSSSSSSSAAMAGKLAKAAYDAKMSKLLREYSQVLVISSDNVGSNQFQGIRRGLHADSVVVMGKNSMMKRSIILDAEKTGNKSFLNLVPLLVGNVALIFTKGDLREVSEQIAKHKVVQPILMCPKYTSYDTYHNCSYMQSGQIPLGLTCCNPQSSQVSEPFLVCSKFMPHQHCFLMRSRQFLMTSIWSPLLLLAGNL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00466 264 MobiDBLite consensus disorder prediction 1 23 - -
Spst8g00466 264 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 83 215 - -
Spst8g00466 264 SUPERFAMILY Ribosomal protein L10-like 84 181 IPR043141 -
Spst8g00466 264 Gene3D - 81 200 IPR043141 -
Spst8g00466 264 MobiDBLite consensus disorder prediction 1 27 - -
Spst8g00466 264 Pfam Ribosomal protein L10 83 180 IPR001790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00466 Spst-Chr8 4433297 4436606 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00466 84 233 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 48.750 5.73e-44 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00466 K02941 - mnt:21409050 154.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00466 8 4433297 4436606 Spst8g00466 8 4433297 4436606 ECH