Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00465 ATGAATCAGAACCCATCCATTTCTTTGCCTCACTCATCTGCAGAATACCTCAACGAAGAAGAGGTTAAAGAGACGGCACCGTTTTGCTCATCATCTTCAATGGCACCTAAACAAACCAAGGCAGAGAAAAAGATCGCTTACGATGGGAAGCTCTGCCAGCTTCTGGAAGAATACGGCCAAATCCTTGTGGTGAACGCGGATAACGTGGGATCCAACCAGCTCCAAAACATCCGCAAAGGCCTCCGCGGCGACTCCGTCGTCCTCATGGGGAAAAACACGATGATGAAGCGTTCCGTCAGGATACACGCAGAGAAAACAGGCAACAACGCATATCTCAACCTAATCCCCCTCCTTGTCGGCAATGTGGGATTGATTTTCACCAAGGGTGACTTGAAGGAGGTCAGTGAGGAGGTTGCTAAGTACAAGGTTGGAGCTCCTGCTCGCGTTGGGTTGGTTGCCCCAATTGATGTTGTTGTTCCTCCTGGCAACACGGGTCTTGATCCATCTCAGACCTCTTTCTTCCAGGTTCTGAATATTCCAACAAAGATTAACAAGGGTACTGTGGAAATCATTACCCCTGTGGAACTCATTAAGAAGGGAGAGAAGGTTGGATCTTCTGAAGCTGCATTGCTTGCTAAACTTGGCATAAGACCTTTCTCATATGGGCTTGTGGTTCTTTCCGTCTATGATAATGGGTCTGTATTTAGCCCTGAGGTCCTTGATCTTACCGAGGATGACCTCATTGAGAAGTTTGCCGCCGGTGTTTCCATGGTTACTTCTCTTTCGTTGGCCATCTCATTCCCAACACTTGCAGCTGCCCCACATATGTTTGTGAATGCCTATAAGAATGTCCTTTCTATTGCTGTTGAGACAGATTATTCTTTCCCAGAGGCAGACAAGGTCAAAGAATATCTTAAGGACCCTAGTAAATTTGCTGTAGCTGCTGTTGCTGCCCCTGCTGCTGCTTCGGGTCCTCCAGCTGCTGCAGCCAAAGTAGAGGAAAAGAAGGAAGAGCCAGCCGAAGAATCTGATGATGACATGGGTTTCAGTCTGTTTGACTAA 1062 0.4755 MNQNPSISLPHSSAEYLNEEEVKETAPFCSSSSMAPKQTKAEKKIAYDGKLCQLLEEYGQILVVNADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIEKFAAGVSMVTSLSLAISFPTLAAAPHMFVNAYKNVLSIAVETDYSFPEADKVKEYLKDPSKFAVAAVAAPAAASGPPAAAAKVEEKKEEPAEESDDDMGFSLFD 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00465 353 MobiDBLite consensus disorder prediction 339 353 - -
Spst8g00465 353 PIRSF L10E 34 353 IPR030670 GO:0042254
Spst8g00465 353 FunFam 60S acidic ribosomal protein P0 146 219 - -
Spst8g00465 353 Gene3D - 39 242 IPR043141 -
Spst8g00465 353 Pfam 60s Acidic ribosomal protein 268 352 - -
Spst8g00465 353 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 37 336 - -
Spst8g00465 353 MobiDBLite consensus disorder prediction 321 353 - -
Spst8g00465 353 Pfam Ribosomal protein L10 41 141 IPR001790 -
Spst8g00465 353 Gene3D - 147 218 IPR043164 -
Spst8g00465 353 SUPERFAMILY Ribosomal protein L10-like 41 167 IPR043141 -
Spst8g00465 353 CDD Ribosomal_P0_L10e 42 218 - -
Spst8g00465 353 Pfam Insertion domain in 60S ribosomal protein L10P 147 216 IPR040637 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00465 Spst-Chr8 4419894 4421856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00465 34 352 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 83.386 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00465 K02941 - gmx:547816 560.836