Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00461 ATGAGCATTTTTGACAATGGAACGCTTCTGCTGAATAACATATTGCAGAGTAATTTTGTTGGATTATCTGGTCAAATGAAATTTGAGCCAGATCGGTCTCTCGTTCATCCTGCCTATGGCGTCCTTAATGTGGTTGGAACTGGCCTTAGGAGGATTGGTTACTGGTCCAACTATTCAGATGCCCCTCCTGTCAAAGATTTCCTTGAAACTCACCCAGGTGCTTACACAACATCACATACTCACAACAATGCTTCGTGGTTGTTATTTTGGGAAAGGCACATGAAAAGACTTTCAGAATCTATACAAGTTCTATCAAATTTCGCTCCACAGCTTCTATTTAAATCTAATAATTCTGCAGTTTTGTCACGATCATTAGCAACCTTGCCAATATGGCAACCCACTGTGCAGATGCTTGTTGATGATTCAATATGCAAGGTCTTGCCAATTGCTCTAAAAGAAAGAAATGATTGTGAGGAGCTGGGCATTACAACTCTTGTTAGTGGTAATTTCGAGGAATTAGATGCATGTGAAACTGTCAGCGAGGAAAGCGTGAGTAAAATTCTCGATGTGCATATGCATATTGAGACTTATGTACCTCCTACATTTGATTGGGTTTGGGATTCAAATGATGGGAAGGCCCTGGGTGATTATAGAAATAAATACTCTATTGAAGTACAAACAGCTCCTATCAGCGATGGTGTTCTTCCAGGAACAATACGCCAACTAGTGCTTGAGATATGCAGGAGTGAAGGAATTCCATTTCGAGAAGTTGCTCCATCATGGTCAGAATATGAAATCTGGGAGGAGGCATTCATCACTAATAGCTTGAGGCTTTTGCAACATGTGGACAGTATTCAGGTACCAACAGAATGGAAATCAGCCCACCATTCTAAAACTTGGAAGGATATATCATGGACCAAGGATGATCACAACTGTTATCCAGGAAAAGATTATGGAGAAAGCAGTTCTGGAAGGATACCCAATAAGTAA 990 0.4061 MSIFDNGTLLLNNILQSNFVGLSGQMKFEPDRSLVHPAYGVLNVVGTGLRRIGYWSNYSDAPPVKDFLETHPGAYTTSHTHNNASWLLFWERHMKRLSESIQVLSNFAPQLLFKSNNSAVLSRSLATLPIWQPTVQMLVDDSICKVLPIALKERNDCEELGITTLVSGNFEELDACETVSEESVSKILDVHMHIETYVPPTFDWVWDSNDGKALGDYRNKYSIEVQTAPISDGVLPGTIRQLVLEICRSEGIPFREVAPSWSEYEIWEEAFITNSLRLLQHVDSIQVPTEWKSAHHSKTWKDISWTKDDHNCYPGKDYGESSSGRIPNK 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00461 329 Gene3D - 37 59 - -
Spst8g00461 329 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 224 285 IPR036038 GO:0003824
Spst8g00461 329 Gene3D - 3 36 - -
Spst8g00461 329 Gene3D - 201 309 IPR043132 -
Spst8g00461 329 Pfam Amino-transferase class IV 225 285 IPR001544 GO:0003824
Spst8g00461 329 SUPERFAMILY Periplasmic binding protein-like I 5 64 IPR028082 -
Spst8g00461 329 PANTHER D-AMINOACID AMINOTRANSFERASE-LIKE PLP-DEPENDENT ENZYMES SUPERFAMILY PROTEIN 53 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00461 Spst-Chr8 4356211 4357276 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00461 1 59 Ion Channels AT1G42540 57.627 2.17e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00461 - - ccaj:109819299 370.548