Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00455 ATGCCTTCTTCTGCACCCACCTTCCTCTCCAAATGCACTGTCTTCCCAGACCAAAACTCCACTCTCGGAAACCTCAAACTCTCCGTTTCGGACCTGCCCATGTTGTCCTGCCACTACATCCAAAAGGGATGCCTCTTCACCCAACCCAATATTCCAATCCACTCTTTAATTCCTCTTCTTAAATCCGCACTCTCTCGCACACTTTCTTTCTTTCCCCCTCTCGCTGGCCGTTTAACCACCGATTCCGACGGTTATGTCTACATCGCTTGCAACGACGCCGGCGTCGATTTCGTCCACGCCAATGCCACCGCCCTCCGCATCTGCGACCTATTGTCCCCACTCGACGTCCCTGAATACTTCAAGGAGTTCTTCGCCTTCGATAGGAAAGTCAGCTACAATGGCCATTACTCCCCGATTCTTGCTGTTCAGGTTACCGAGCTCGCTGACGGACTCTTCATCGGCTGCGCCGTCAATCACGCCGTCACCGACGGCACCTCCTTCTGGAACTTCTTCAACACCTTCGCGCAGCTCTGCAGAGGAGCCAATAAAAGCATCCGCAATATACCGGACTTCGACCGCGAGTCCGTTCTGATCTCTGACGCCGTCCTCCGCCTACCGGAGGGCGGTCCCCAGGTCACTTTCGATTCTCACGCGCCGCTGCGCGAGAGAATCTTCAGCTTCAGACGCGAAGCAATTCAGCAGCTGAAGGCCAAGGCGAACAACCGTCGATGGCCGGAAAACAACAGCACCGCGGTAGAGTTGATGCGGAAGCAAAACAACGATCAATTTCATCACCCGAAGGAGAATAACGGCAAGGCAGGCACAATTCTCGAGAACTGGTTCAAGGTTAACTCAAATTCGAAACCGCAAACAGTTACAGAAACGGTGGAGATTTCGTCGTTTCAATCAGTGTGCGCGTTACTGTGGCGCGCTGTGACGCGCGCGAGGAAATTTCCTGCTTCGAAAACGACGACGTTTAGAATGGCGGTCAACTGTCGTCACCGGGTTGAACCAAAATTGGAACCTTACTACTTCGGGAACGCGATTCAGAGCGTGCCAACATATGCTTGTGCTGGTGATGTGTTATCGAGGGATCTACGGTGGTGCGCGGAGCAGCTGAACACAAACGTGAAGGCGCACGATGACGCTATGGTGCGAAGGTTCGTAGACGATTGGGAGCGGAACCCCAGGTGCTTCCCTCTCGGGAACCCTGACGGTGCATCCATCACTATGGGTAGTTCTCCCAGGTTTCCAATGTACGATAACAATTTCGGGTGGGGGAGGCCTCTGGCCGTGAGGAGTGGAAGAGCCAACAAATTCGACGGTAAGATCTCGGCGTTTCCCGGCAGAGATGGAGCAGGGACCGTTGATCTGGAGGTTGTTTTAGCGCCCGAAACCATGGAAGCGCTGGAGTCTGATCCCGAATTCACCAAATATGCAACGTGTCAGTTATGA 1455 0.5368 MPSSAPTFLSKCTVFPDQNSTLGNLKLSVSDLPMLSCHYIQKGCLFTQPNIPIHSLIPLLKSALSRTLSFFPPLAGRLTTDSDGYVYIACNDAGVDFVHANATALRICDLLSPLDVPEYFKEFFAFDRKVSYNGHYSPILAVQVTELADGLFIGCAVNHAVTDGTSFWNFFNTFAQLCRGANKSIRNIPDFDRESVLISDAVLRLPEGGPQVTFDSHAPLRERIFSFRREAIQQLKAKANNRRWPENNSTAVELMRKQNNDQFHHPKENNGKAGTILENWFKVNSNSKPQTVTETVEISSFQSVCALLWRAVTRARKFPASKTTTFRMAVNCRHRVEPKLEPYYFGNAIQSVPTYACAGDVLSRDLRWCAEQLNTNVKAHDDAMVRRFVDDWERNPRCFPLGNPDGASITMGSSPRFPMYDNNFGWGRPLAVRSGRANKFDGKISAFPGRDGAGTVDLEVVLAPETMEALESDPEFTKYATCQL 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00455 484 Gene3D - 7 203 IPR023213 -
Spst8g00455 484 Pfam Transferase family 7 476 - -
Spst8g00455 484 Gene3D - 219 475 IPR023213 -
Spst8g00455 484 SUPERFAMILY CoA-dependent acyltransferases 35 181 - -
Spst8g00455 484 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00455 Spst-Chr8 4312511 4313965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00455 59 471 Monolignol Biosynthesis Gene Families AT5G48930 28.132 2.65e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00455 - - gmx:100500612 860.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00455 8 4312511 4313965 Spst8g00455 8 4312511 4313965 ECH
Spst1g02141 1 29556139 29557750 Spst8g00455 8 4312511 4313965 PCT
Spst8g00455 8 4312511 4313965 Spst8g00455 8 4312511 4313965 PCT