Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00441 ATGGGAGCGAAATATGAGGCTATCCACTCTCTCTTCGTTTCAAATGGTTTTAAAATCTGCTTCCGCCGAACCTTGAAGAGAAGAGGAGAAGAAGAAGGAAGAGGCATCACCATTACCAAGATGGTTAAAGGACGCAAGGGAGAACGTATCAGACTTTACGTCAGGGGTACAATTCTTGGATACAAGAGGTCCAAATCAAATCAGTACCCAAATACTTCCCTCATCCAGATTGAGAATGTAAACTCCAAGGAAGAAGTTGCGTGGTACGCTGGGAAGCGCATGGCTTACATTTACAAAGCTAAGGTAAAGAAGGATGGAAGCCACTTTCGCTGCATTTGGGGTAAAGTCACCAGGCCTCATGGAAACAGTGGTGTCGTTAGAGCTAAGTTCAAGTCAAATCTTCCGCCAAGATCGATGGGAGCGAGGGTTTTCCTGATTGAACTTAATGCTGCTCTTCTGATTGCACACAGTTCTTCTTGGGAACCTAGTTATACAACAACAATTCCCAGGATTTTATATGTGCAGATAGAAAGTGAGGAACCTTTCTGCTTGAGCCTTCTCCTTTGTCCATGGAGATATGCTCCAATGTAA 591 0.4399 MGAKYEAIHSLFVSNGFKICFRRTLKRRGEEEGRGITITKMVKGRKGERIRLYVRGTILGYKRSKSNQYPNTSLIQIENVNSKEEVAWYAGKRMAYIYKAKVKKDGSHFRCIWGKVTRPHGNSGVVRAKFKSNLPPRSMGARVFLIELNAALLIAHSSSWEPSYTTTIPRILYVQIESEEPFCLSLLLCPWRYAPM 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00441 196 ProSitePatterns Ribosomal protein L35Ae signature. 114 135 IPR018266 GO:0003735|GO:0005840|GO:0006412
Spst8g00441 196 Gene3D translation elongation factor selb, chain A, domain 4 46 150 IPR038661 -
Spst8g00441 196 Pfam Ribosomal protein L35Ae 52 144 IPR001780 GO:0003735|GO:0005840|GO:0006412
Spst8g00441 196 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 54 146 IPR001780 GO:0003735|GO:0005840|GO:0006412
Spst8g00441 196 SUPERFAMILY Translation proteins 52 145 IPR009000 -
Spst8g00441 196 FunFam 60S ribosomal protein L35a 47 150 - -
Spst8g00441 196 PANTHER 60S RIBOSOMAL PROTEIN L35A 42 145 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00441 Spst-Chr8 4201994 4204898 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00441 41 143 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 86.408 3.81e-64 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00441 K02917 - gmx:100305997 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00441 8 4201994 4204898 Spst8g00441 8 4201994 4204898 ECH