Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00426 ATGAATATGGTGTTTGTGACGGGGCTTGTCTTCATAAGCCTTATCTCAGTTACATCTGCTATTTCTGGAACTGCTACTTATTACACAGTTTACAAACCATCTGCATGCTACGGGTACCAAGATGAGGGAACGATGATAGCTGCTGCAAGCGACGCATTATATGCGAATGGAGCTGCGTGTGGTCAAATGTATAAGATCAAATGCACAGGTGGTACTAACCAAGGTGTGCCTCACCCATGCAAGGGTGGCAGTGTTACGGTCAAGATTGTCGATCGTTGCCCTTCCCCAGGTTGCCAAGCCACCATTGATCTCTCCCAAGAAGCTTTCTCTGCAATCGCTGTCCTCAATGCTGGAAAAATTCTAATTGATTACTCCAAGTACTTAATGAACCACTTAATCACCTGTATCTCCTTCAATGGCGTGACGCTCCTACAAGATCGAGATCAATCGTGCAAGTGCATGCCCAGCTAA 471 0.4586 MNMVFVTGLVFISLISVTSAISGTATYYTVYKPSACYGYQDEGTMIAAASDALYANGAACGQMYKIKCTGGTNQGVPHPCKGGSVTVKIVDRCPSPGCQATIDLSQEAFSAIAVLNAGKILIDYSKYLMNHLITCISFNGVTLLQDRDQSCKCMPS 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00426 156 CDD DPBB_EG45-like 21 125 - -
Spst8g00426 156 SUPERFAMILY Barwin-like endoglucanases 10 125 IPR036908 -
Spst8g00426 156 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 3 125 IPR044206 GO:0009627|GO:0048046
Spst8g00426 156 Gene3D - 19 127 IPR036908 -
Spst8g00426 156 SMART dpbb_1 46 124 IPR007112 -
Spst8g00426 156 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 22 126 IPR007112 -
Spst8g00426 156 FunFam Barwin-related endoglucanase 20 126 - -
Spst8g00426 156 Pfam Lytic transglycolase 47 124 IPR009009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00426 45 126 Expansin Gene Family AT2G45110 34.409 1.34e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00426 - - pop:7493352 195.667