Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00425 ATGAGGATTTACTCTCTTAACGGCACCATATCCACTGCGGATCAAACCCCTAAAGTTTTCATCCAATTTCTTGGCTATAAAAAGGTGAGACAAGGGTGTGTCCCTTCACATCCTTTGCTTGTCAAGAGAGAAAAATATGTGTGGTCGACGACATTGATCTACATGGGCGAGTATCCGAAGAGCATGGAATTCACAGAATCACTTCACACCAGTGTGGTTCAAAAAGTCCTCGGCAGCAAATTTGCACCAGATATTTTGCTGTACAGCTACAAGAGTTTCAATGGATTTGTGGCGAGGCTAACAAAAAAAGAATCAGCAAGAATGAAAGGAATGCATGGTGTGGTTTCTATCATACCAAATAGAGTCCATAATATCCAAACATCAAGGTCCTGGGACTTCATTGGCTTCCCTGAAAATGTCCCAAGAACGAACATAGAAAGTAACACAATCGTTGGAGTCATTGATTCTGGAATTTGGACTAATACCTATAGCTTTATAGACACAGGATTTGGTCCACCACCACAGAAATGGAAGGGAACATGCTACAACTTCACTTGCAATAACAAAATAATTGGAGCAAAATATTTTCGCATTGGAGGTGTGTTCTCCAGTGAGGACATCATATCTCCGACGGATACGAGTGGTCACGGGTCTCACTGTGCATCCACTGCTGCTGGAATTCATGTTAGGAATGCAAATCTGTTTGGGCTTGGCTTAGGAACAGCCAGAGGAGGAGCTCCATTAGCCCGCATTGCTGTGTATAAAGTTTGTTGGACAAGGGGTTGTAATGGTGCTGACATTCTTGCAGCATTTGATGAAGCCATTGTCGATGGAGTTGACATTCTTTCTGCTTCATTGGGACCTACAGTCGTCGTACACGCCCCATATTTTCAAGATGTATTTGCAATAGGAGCTTTCCATGCAATGAAGAGAGGCATATTAACTTCTAAATCTGCAGACAATTTGGGTCCAAACCCTTTCACAATGTCAAATGTTGCACCCTGGTTCATTTCTGTGGCTGCCACCACCATAGACAGAAAATTTTTCACCACTCTCCAACTGGGCAATGGCCAGATCTTCCAGGGAGTTTCAGTAAATACATTTACTCCAACACAGAGAGGTTATCATTTAATTTATGGTGGAGATGCACCCGCTGCTGGACATGATAGTTCCACATCCAGGTTTTGCCGTGAAAATTCTTTGAATGGAGCTCTGGTGAGTGGGAAAATTGTTTTATGCGATGGCTATTCTCATTCTTCACGTGTGGGATTTGCTTCTGGGGCTGCTGGACTTATATTCAGAAGTACATTGCCTTTAGTTGTGGCCGATATATTTGCATTGCCAGCAGTTCACATTACTGCAAGTGACGGGAACCTCGTTTATTCTTATATAAAGTCAACAAGCACTCCAGCGGCTATCATATATAGGAGTCATGAGGGAAAAGATCCATTAGCCCCTTTCGTGCCTCGTTTCTCGTCAAGAGGTCCAAATAAGGTCACTCCAGACATTCTTAAGCCTGATATAGCAGCTCCAGGAGTTGACATTCTGGCTGCATGGTCTCCAATTTCTCCTATTTCTAGTGTTAAAGGAGAAACTAGAATATCGAACTTCAGTATCATATCTGGAACTTCAATGGCATGCCCTCATGTTACTGCAGCAGCTGTTTACGTCAAATCATTTCATCCCAACTGGTCTCCTGCTGTACTTAAATCCGCATTGATGACAACTGGCGTGAAAAATGTAGGAGAAATGGGCTTAAATATTTCTGTTGGGAAAACCTTATGCATTGCCAATTTTGATCTTTTATTATTTACAGCTACCCCTCTGAGTTCTGCACTTAATACGGACGCTGAATTTGCTTATGGTGCGGGGCAAATCAATCCTGTCAAGGCCATAACTCCTGGACTGGTCTATGATGCTGACCAATATGATTATGTTAAGTTTCTGTGTGGACAAGGTTATAGTTCATCGTTGCTTCAAATAATTACAGGAGATAATAGCACTTGTACAGCAGCAAATATAGGATCTGTTTTCAACCTGAATCTCCCATCTTTTGCTCTAGCTACAGCTCGCAATAGCCATACCAGTGTCACTTTTGGTAGAACTGTTACAAATGTGGGATCGGCTACATCCAGATATAGGGCCATAATAAGTACACATCCATCTTCTTTAAACATCCAAGTAGTGCCAGATGTTTTGGTCTTCTCATCTTTGGGTCAGAAGCTGTCCTTCACCCTTAAGATTGAAGGAAGCATCAATGCAGACATAGTTTCTTCGTCTTTGATTTGGGATGATGGCACTTTTCAGGCTAGGAGCCCCATTGTTGTTTATGTTTCATAA 2340 0.4226 MRIYSLNGTISTADQTPKVFIQFLGYKKVRQGCVPSHPLLVKREKYVWSTTLIYMGEYPKSMEFTESLHTSVVQKVLGSKFAPDILLYSYKSFNGFVARLTKKESARMKGMHGVVSIIPNRVHNIQTSRSWDFIGFPENVPRTNIESNTIVGVIDSGIWTNTYSFIDTGFGPPPQKWKGTCYNFTCNNKIIGAKYFRIGGVFSSEDIISPTDTSGHGSHCASTAAGIHVRNANLFGLGLGTARGGAPLARIAVYKVCWTRGCNGADILAAFDEAIVDGVDILSASLGPTVVVHAPYFQDVFAIGAFHAMKRGILTSKSADNLGPNPFTMSNVAPWFISVAATTIDRKFFTTLQLGNGQIFQGVSVNTFTPTQRGYHLIYGGDAPAAGHDSSTSRFCRENSLNGALVSGKIVLCDGYSHSSRVGFASGAAGLIFRSTLPLVVADIFALPAVHITASDGNLVYSYIKSTSTPAAIIYRSHEGKDPLAPFVPRFSSRGPNKVTPDILKPDIAAPGVDILAAWSPISPISSVKGETRISNFSIISGTSMACPHVTAAAVYVKSFHPNWSPAVLKSALMTTGVKNVGEMGLNISVGKTLCIANFDLLLFTATPLSSALNTDAEFAYGAGQINPVKAITPGLVYDADQYDYVKFLCGQGYSSSLLQIITGDNSTCTAANIGSVFNLNLPSFALATARNSHTSVTFGRTVTNVGSATSRYRAIISTHPSSLNIQVVPDVLVFSSLGQKLSFTLKIEGSINADIVSSSLIWDDGTFQARSPIVVYVS 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00425 779 CDD Peptidases_S8_3 123 576 IPR034197 -
Spst8g00425 779 Pfam Fibronectin type-III domain 679 776 IPR041469 -
Spst8g00425 779 ProSitePatterns Serine proteases, subtilase family, histidine active site. 216 226 IPR022398 -
Spst8g00425 779 Pfam Peptidase inhibitor I9 65 122 IPR010259 -
Spst8g00425 779 SUPERFAMILY Subtilisin-like 126 636 IPR036852 GO:0004252|GO:0006508
Spst8g00425 779 PRINTS Subtilisin serine protease family (S8) signature 146 165 IPR015500 -
Spst8g00425 779 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Spst8g00425 779 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Spst8g00425 779 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 44 125 IPR037045 -
Spst8g00425 779 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 75 776 IPR045051 -
Spst8g00425 779 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Spst8g00425 779 CDD PA_subtilisin_like 351 474 - -
Spst8g00425 779 Gene3D - 345 481 - -
Spst8g00425 779 Gene3D Peptidase S8/S53 domain 149 645 IPR036852 GO:0004252|GO:0006508
Spst8g00425 779 ProSiteProfiles Serine proteases, subtilase domain profile. 130 632 - -
Spst8g00425 779 Gene3D - 649 778 - -
Spst8g00425 779 Pfam Subtilase family 147 587 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00425 Spst-Chr8 4055134 4064745 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00425 52 777 Subtilisin-like Serine Gene Family AT5G59100 44.355 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00425 - - var:108336584 1080.47