LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst8g00424	ATGAGAGAAATGGATAGTGTGGTTTCTGTTATACCAGACAGTATCCAAAAGCCCCAAACATCAAGGTCTTGGAACTTTCTTGGCTTCCCCGAAGATGTTAAAAGAAATACTGTAGAAGAAAGCAACACAATCATTGGAGTAATTGATACTGGAATTTGGATTGATGCTGATAGCTTTAAGGACACTGGATTTGGTCCAGCACCAACGAAATGGAAGGGCATTTGTCAAGACTTCACTTGCAATAACAAGGTAATTGGGGCAAGACACTTACGCCTTAAGGGTTTGATTTCTAGAGATGACATAAAATCTCCAAATGATACAAATGGTCATGGGAGTCATTGTGCATCCATTGCTGCTGGAAACATAGTTAGGTCGGCAAGTGTGTTAGGGTTTGCTCCAGGAACATCCAGAGGAGGAGTTCCATCAGCACGTATTGCTGTATACAAAGTGTGTTGGGAAGTGGGTTGTTCAACTGTTGACATCCTTGCAGCATACGATTACGCCATTGCAGATGGTGTTGACATCCTTTCTGTCTCAGTCGGAGCTACAACCGCAGGGCAAAAGAATTATTTTGATGACCCGCATTCAATAGGAGCTTTCCATGCAATGAAGAAAGGCATATTAACATCAACATCTGCAGATAATTTGGGCCCAACACCTTACACAACCTCAAAGTTGGCACCTTGGTTGCTTTCTGTAGCTGCCTCCACTACAAATACAACCTTTCTCACCAGAGTCCAGTTGGGCAATGGCAAGATTTATGAGATACCATTAGTGTATGGTGGAGATGCAACCAAGGCTGGAGCTAATAGTACCCTATCTAGTGCCTGCTTTGAAAATGCTCTGGATGCAACTGTGGTGAAGGGAAAGATTCTTTTGTGTGACAAAATCCCTTTTCCTTCATTTGTGGGATTAGCTCAGGGAGCTGCTGGTGTTATAATTAGAAGTGATGCTGTTCCTTTAGATGTCTCAAAAGTATTTGCATTGCCAGCTGTCCACATTAGCCTAAGTGACGGCAACCTCATATATTCTTATCTAAAATCATCGAGTTACGAAGGGAAGGATACAACAGCCCCAAACATTGGTCATTTCTCATCTAGAGGCCCAAACAAAATCACTCCAGAGATTCTTAAGCCTGATTTAGCTGCTCCAGGAGTGAACATTGTAGCTGGATGGTCTCCACTTGGTTCAATTTCTGAGGTTAAAAGCGATCCTAGAAGATCAGAATACAATGTACAATTTGGAACTTCAATGGCATGCCCTCATGTTACTGCTGCAGCTGCTTACGTCAAAACATTTCATCCCAACTGGTCTCCTGCTGTACTTAAATCCGCATTAATGACAACTGCTACTCCTATCAATGGTGCACTTAAGGGAGATAATGAATTTGCTTATGGTGCGGGGCAAATCAATCCTATCAAGGCAGTAAATCCTGGATTAGTTTATGATGCTACTGAAACTGATTATGTCAAGTTTCTGTGCGGACAAAATTATTCTACAGCATTTCTGCAAAAAGTCACAGGAGATAATAGCACTTGTACGGGTGCAAATAAGGGATCTGTTTTGGACCTTAATCTCCCATCTTTTGCTCTATCTACAACTCGTTCAAAGACCAATGATGTAACTTTCAGTAGAACTGTAACAAATGTTGGATCAAGTAAGTCCTCGTATAAAGCCAAAATAACTACACCTTCGTCTTCCTTGAGCATCAAAGTAGAGCCAAATGTTTTGAGCTTCTCAGCTTTGGGTGAGAAGAAGACGTTCACCCTCAAGATTGAAGGAAAGATTGATGCAGATACAGTTTCTTCGTCTTTGGTCTGGGATGATGGCACTTTTCAAGTAAGGAGCCCCGTTGTTGTTTATGTTCTCCCATAA	1875	0.4181	MREMDSVVSVIPDSIQKPQTSRSWNFLGFPEDVKRNTVEESNTIIGVIDTGIWIDADSFKDTGFGPAPTKWKGICQDFTCNNKVIGARHLRLKGLISRDDIKSPNDTNGHGSHCASIAAGNIVRSASVLGFAPGTSRGGVPSARIAVYKVCWEVGCSTVDILAAYDYAIADGVDILSVSVGATTAGQKNYFDDPHSIGAFHAMKKGILTSTSADNLGPTPYTTSKLAPWLLSVAASTTNTTFLTRVQLGNGKIYEIPLVYGGDATKAGANSTLSSACFENALDATVVKGKILLCDKIPFPSFVGLAQGAAGVIIRSDAVPLDVSKVFALPAVHISLSDGNLIYSYLKSSSYEGKDTTAPNIGHFSSRGPNKITPEILKPDLAAPGVNIVAGWSPLGSISEVKSDPRRSEYNVQFGTSMACPHVTAAAAYVKTFHPNWSPAVLKSALMTTATPINGALKGDNEFAYGAGQINPIKAVNPGLVYDATETDYVKFLCGQNYSTAFLQKVTGDNSTCTGANKGSVLDLNLPSFALSTTRSKTNDVTFSRTVTNVGSSKSSYKAKITTPSSSLSIKVEPNVLSFSALGEKKTFTLKIEGKIDADTVSSSLVWDDGTFQVRSPVVVYVLP	624

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst8g00424	624	CDD	PA_subtilisin_like	246	350	-	-
	Spst8g00424	624	Pfam	Fibronectin type-III domain	523	620	IPR041469	-
	Spst8g00424	624	Pfam	Subtilase family	41	467	IPR000209	GO:0006508\|GO:0008236
	Spst8g00424	624	ProSiteProfiles	Serine proteases, subtilase domain profile.	23	476	-	-
	Spst8g00424	624	ProSitePatterns	Serine proteases, subtilase family, serine active site.	415	425	IPR023828	-
	Spst8g00424	624	CDD	Peptidases_S8_3	16	451	IPR034197	-
	Spst8g00424	624	Gene3D	Peptidase S8/S53 domain	43	489	IPR036852	GO:0004252\|GO:0006508
	Spst8g00424	624	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	2	620	IPR045051	-
	Spst8g00424	624	Pfam	PA domain	257	341	IPR003137	-
	Spst8g00424	624	Gene3D	-	493	623	-	-
	Spst8g00424	624	ProSitePatterns	Serine proteases, subtilase family, histidine active site.	110	120	IPR022398	-
	Spst8g00424	624	Gene3D	-	239	354	-	-
	Spst8g00424	624	PRINTS	Subtilisin serine protease family (S8) signature	40	59	IPR015500	-
	Spst8g00424	624	PRINTS	Subtilisin serine protease family (S8) signature	414	430	IPR015500	-
	Spst8g00424	624	PRINTS	Subtilisin serine protease family (S8) signature	106	119	IPR015500	-
	Spst8g00424	624	SUPERFAMILY	Subtilisin-like	19	480	IPR036852	GO:0004252\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst8g00424	Spst-Chr8	4051305	4054696	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst8g00424	5	623	Subtilisin-like Serine Gene Family	AT5G59090	46.401	0.0	538

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst8g00424	-		-	gmx:100793805	876.315