Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00404 ATGACTAGCTCTAGTCTTCAACACCATATCTGGCTTGGAAGGAAGTATTGGATCCTTTCCACCTATTTGAGGATTTCGACTCGCCGCGTTGACTCGGTCTGGGTTGGAGTCGACTCAGTTCGCTTTTTCATTCTCGCGGATCTAAAGTTAGATGTATCAGTGTGCTCCTCAGATCTGGTGCTGCTGTGTGTTGTAGAAGTCCCTGCTCTCTCTGTAGCTGTGTTTGTGCTAGCTCTTCTTTCCTTCCTGGCATCGGAAAGTAAAGGGGACATCAAAATGAAGGCATTGATTCTGGTTGGGGGATTTGGAACAAGGTTGAGGCCACTGACACTCAGTTTCCCTAAGCCTCTTGTTGATTTTGCCAACAAGCCTATGATTTTACATCAGATAGAGGCCCTTAAGGCCATTGGAGTTACTGAGGTGGTGCTAGCAATCAATTACCAACCAGAGGTTATGTTAAATTTTTTGAAGGATTTTGAAACAAAGCTTGGCATCAAGATCACATGTTCTCAAGAAACTGAACCACTAGGAACAGCGGGACCCCTGGCTCTTGCTAGGGATAAGCTGATAGATGACTCAGGAGAGCCCTTTTTTGTTCTCAACAGTGATGTTATCAGCGAGTATCCACTTAAGGAAATGATTGAATTCCATAAAGGCCACGGAGGAGAGGCTTCCATAATGGTAACAAAGGTTGACGAGCCATCAAAATACGGTGTGGTTGTGATGGAAGATAGCACAGGGAAGGTTGATAAATTTGTCGAGAAACCGAAATTGTTTGTTGGCAACAAAATCAATGCTGGAATTTACCTGCTGAACCCCTCTGTTTTGGACCGAATTGAACTGAGGCCCACTTCTATCGAGAAAGAGGTGTTTCCAAAGATTGCTGCAGAGAAAAAGCTATTTGCAATGGTCCTTCCAGGATTCTGGATGGACATTGGACAGCCAAGGGATTATATTTCTGGTCTGAGGCTTTACCTGGACTCGTTGAGGAAGAAGTCATCTTCTAAGTTGGCCAGTGGCTCTCAAATTGTGGGGAATGTCATTGTGGATGAGACAGCTAAAATTGGCGAGGGATGTCTCATTGGACCTGATGTTGCTATTGGTCCTGGCTGCATTATTGAGCAAGGTGTTAGACTAAAAAGCTGCACAATAATGCGAGGAGTCAGGGTTAAGAAGCATGCTTGTGTCTCCAGCAGTATTATTGGGTGGCATTCCACTGTTGGTCAATGGGCCCGAGTGGATAATATGACCATCCTCGGAGAAGATGTCCATGTATGTGATGAAATTTACAGCAATGGTGGTGTGGTTTTACCGCACAAAGAAATCAAGTCCAACATACTGAAGCCAGAGATTGTCATGTGA 1362 0.4471 MTSSSLQHHIWLGRKYWILSTYLRISTRRVDSVWVGVDSVRFFILADLKLDVSVCSSDLVLLCVVEVPALSVAVFVLALLSFLASESKGDIKMKALILVGGFGTRLRPLTLSFPKPLVDFANKPMILHQIEALKAIGVTEVVLAINYQPEVMLNFLKDFETKLGIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKEMIEFHKGHGGEASIMVTKVDEPSKYGVVVMEDSTGKVDKFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEVFPKIAAEKKLFAMVLPGFWMDIGQPRDYISGLRLYLDSLRKKSSSKLASGSQIVGNVIVDETAKIGEGCLIGPDVAIGPGCIIEQGVRLKSCTIMRGVRVKKHACVSSSIIGWHSTVGQWARVDNMTILGEDVHVCDEIYSNGGVVLPHKEIKSNILKPEIVM 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00404 453 FunFam mannose-1-phosphate guanyltransferase beta 93 324 - -
Spst8g00404 453 CDD M1P_guanylylT_B_like_N 93 326 IPR045233 GO:0004475|GO:0005525|GO:0009298
Spst8g00404 453 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 92 325 IPR029044 -
Spst8g00404 453 Pfam Nucleotidyl transferase 94 321 IPR005835 GO:0009058
Spst8g00404 453 Pfam Bacterial transferase hexapeptide (six repeats) 353 385 IPR001451 -
Spst8g00404 453 Gene3D Hexapeptide repeat proteins 327 449 - -
Spst8g00404 453 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 93 452 - -
Spst8g00404 453 SUPERFAMILY Nucleotide-diphospho-sugar transferases 92 404 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00404 Spst-Chr8 3884775 3892032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00404 85 239 Eukaryotic Initiation Factors Gene Family AT4G18300 23.926 2.02e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00404 K00966 - gmx:100808375 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00404 8 3884775 3892032 Spst8g00404 8 3884775 3892032 ECH
Spst8g00404 8 3884775 3892032 Spst8g00404 8 3884775 3892032 PCT