Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00387 ATGGCTTCTAGCTCCCACAACAGCAACAGCAACAGCAACAGCAACAAGGAAAACCCTTCTTCTTGGACACGCATGCAGAACAAGCAATTCGAAAGCGCACTTGCCTTGTATGATCAAGACACCCCAGATCGATGGCAAAACATAGCCAGAATAGTTGGTGATAAATCTGCTGAGGAAGTTAAGAGACACTATGAAATCCTTGTGGAGGACCTTAGGCATATAGAGTCTGGACGTGTTCCAATTCCCAGCTATAAGTCCACTGATCATCTTAATAATGAAGAGAGGCCTCTCAAGTATCGTAATCAGCGTTGA 312 0.4455 MASSSHNSNSNSNSNKENPSSWTRMQNKQFESALALYDQDTPDRWQNIARIVGDKSAEEVKRHYEILVEDLRHIESGRVPIPSYKSTDHLNNEERPLKYRNQR 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00387 103 SUPERFAMILY Homeodomain-like 21 74 IPR009057 -
Spst8g00387 103 SMART sant 18 70 IPR001005 -
Spst8g00387 103 Gene3D - 12 81 - -
Spst8g00387 103 MobiDBLite consensus disorder prediction 79 103 - -
Spst8g00387 103 MobiDBLite consensus disorder prediction 88 103 - -
Spst8g00387 103 ProSiteProfiles Myb-like domain profile. 14 68 IPR001005 -
Spst8g00387 103 MobiDBLite consensus disorder prediction 1 25 - -
Spst8g00387 103 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 9 92 IPR044636 GO:0003700
Spst8g00387 103 CDD SANT 22 64 IPR001005 -
Spst8g00387 103 FunFam Transcription factor SRM1 14 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00387 Spst-Chr8 3785750 3787504 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Spst8g00387 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00387 - - gmx:100788168 167.548