Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00365 ATGTCAAAGGGTGATAAGGTTGTGGTTTTGGACTTTTGGGCTAGTCCATTTTGTGCTAGAGTGAAAATTGCTTTGGAAGAGAAGGGGGTGAGCCATGTTGACAGTGAAGAGGATTTGTTTGGGGGAAAGAGCGAGCTTCTCCTGAAGTCAAATCCCATTCATCAAAAAGTTCCTGTGCTTTTGCACAATGACAAACCTATTGCTGAGTCTGCTATCATTGTTAGCTACATTGATGAAGCTTGGCCTTTCAACTCTCTGCTTCCAACTCTCGCTTATGATCGTGCCCAAGCCAGATTCTGGGTTGATTACATCGACAAAAAGGTATTTGAAACCGGGAGGAGCATCTGGGCAAGCAATGGAGAAGAGAGAGAAGTGGCCACCAGGGACTTCTTTGAAATTTTAACGCATCTTGAGGAAGCTCTGGGGGAGAAGAACTATTTTGGTGGTGATGCCTTTGGATATCTGGACATCATAGCGATTCCTCATTCAGCTTGGTTTTTGACCTATGAGAGGCTCGGGGGATTCAAAATTGAAGACCATTCACCAAAGATCTCAGCTTGGATTAAGAGGTGTTTGCAAAGGGAGTCTGTTGCCAAAGTCCTGCCAGACCCAGAGAAGGTCTACCAGTTTGCCCTTCACTTCAGGAAGATCTCTACTTTTGATCCATCTGAACCTTCACCAGGATCTGAGAAGATCAATGGCCGAAAGATTGAGTTGGAGATCATTCCTGAAGTTGATCTCTACAAGTGTGAACCCTGGGACTTACCAGGGAAATCATTGTTACCGGGGAAGGACCTGGAGTGGTATTTCTTCAGCCCTCGTGATAGAAAATACCCGAATGGATCAAGAACAAACCGTGCAACAAAATCTGGGTATTGGAAGGCGACAGGGAAGGATAGGAAAGTAAATTCAAAGGCTCGGGCTGTGGGGATGAAGAAAACCCTAGTTTACTATCGAGGAAGAGCACCCCATGGCTCTCGTACAAATTGGGTTATGCATGAATACCGTCTTGATGAGACACAATGCGAAACTGCTTCCGGCTTGCAGGATGCATATGCTCTTTGCCGTGTGTTGAAGAAGAGTGCAGTGATTCCCCCAAAAGTTGAGGGGCAGTATGTTCATGTTCCCATTGTCAATCAGATTACCAGCGATCAATCATCAAGCATTGAACTATACCCTGAAGGAAGGGGTGAAGACTTAGATAGCTCAAATTATCTTACGCCAATGGATACTTATTCACCCCACAACGTGAGAAATGAAACTTCACTGATTATCAATGGTGGGATGAAGGATCATGAGAAATGGTCACACTTCTCATCACAAGACCCATTATTCAGTCTTCCCACTTCTTCATTTCCCCATTTCGGAGCCATTCCATACCCTCCATCCAAGGTGGATATAGCACTAGAGTGTGCAAGAATGCAGCATAGGTTTGTTATGCCCCCTTTGGAGGTGGAGGACTTCCCACAAGTTGGAATGTCAGAGCTGAAAATGGCACAAGCCTCTAGTTCCATGCAAGGAAGCAGAACTGAAACGGATATTTTGCAGGAAATTCTTTCAGTTGCTCATGCTTCTAAGGAGTTAATAAATCAATCCAGTTACTCACAGGAATGGGTTGGCAATGATTATTATGCTCCTCGTGAAGACGATTTTACCTTCATGGTCGGCACCAATTACAACCATTCAAATGAAATGAACTCAGTGAGGTATGTTGACAAAGCATGGGAAGACGCAAACACAAGGACAATAGAGATCGGAGATATGGATGAAGAATTTAAGGCAGAGAGGATGGTAGAGAATTTAAGGTGGGTTGGAATGTCAAAAGAAGATTTAGAAAAGTTTCAGCAGCTAGCTATGTATTCCGCTTCAGTCGTTGATTGTGCCACGGTTGCTTGCTTCTTTGATGCCCATGAGAAAAAACCCGATCCAAGTGAGAAGGCGTATCCCGACGTACTCTTCATGTCGTCTATTGATCCTGCCCAATCACCGTCGGTGTAG 1998 0.4459 MSKGDKVVVLDFWASPFCARVKIALEEKGVSHVDSEEDLFGGKSELLLKSNPIHQKVPVLLHNDKPIAESAIIVSYIDEAWPFNSLLPTLAYDRAQARFWVDYIDKKVFETGRSIWASNGEEREVATRDFFEILTHLEEALGEKNYFGGDAFGYLDIIAIPHSAWFLTYERLGGFKIEDHSPKISAWIKRCLQRESVAKVLPDPEKVYQFALHFRKISTFDPSEPSPGSEKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSKARAVGMKKTLVYYRGRAPHGSRTNWVMHEYRLDETQCETASGLQDAYALCRVLKKSAVIPPKVEGQYVHVPIVNQITSDQSSSIELYPEGRGEDLDSSNYLTPMDTYSPHNVRNETSLIINGGMKDHEKWSHFSSQDPLFSLPTSSFPHFGAIPYPPSKVDIALECARMQHRFVMPPLEVEDFPQVGMSELKMAQASSSMQGSRTETDILQEILSVAHASKELINQSSYSQEWVGNDYYAPREDDFTFMVGTNYNHSNEMNSVRYVDKAWEDANTRTIEIGDMDEEFKAERMVENLRWVGMSKEDLEKFQQLAMYSASVVDCATVACFFDAHEKKPDPSEKAYPDVLFMSSIDPAQSPSV 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00365 665 Pfam Glutathione S-transferase, N-terminal domain 9 79 IPR004045 -
Spst8g00365 665 SFLD Main (cytGST) 4 217 - -
Spst8g00365 665 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
Spst8g00365 665 FunFam Tau class glutathione S-transferase 1 89 - -
Spst8g00365 665 Gene3D - 90 220 - -
Spst8g00365 665 Gene3D Glutaredoxin 1 89 - -
Spst8g00365 665 SFLD Main.3: Omega- and Tau-like 4 217 IPR045073 -
Spst8g00365 665 CDD GST_N_Tau 7 81 - -
Spst8g00365 665 FunFam Nac domain-containing protein 86 228 363 - -
Spst8g00365 665 CDD GST_C_Tau 91 214 IPR045074 GO:0004364|GO:0006749
Spst8g00365 665 Pfam Glutathione S-transferase, C-terminal domain 126 190 - -
Spst8g00365 665 Gene3D NAC domain 229 363 IPR036093 GO:0003677|GO:0006355
Spst8g00365 665 Pfam No apical meristem (NAM) protein 230 337 IPR003441 GO:0003677|GO:0006355
Spst8g00365 665 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 209 IPR045073 -
Spst8g00365 665 SUPERFAMILY NAC domain 230 360 IPR036093 GO:0003677|GO:0006355
Spst8g00365 665 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 85 IPR004045 -
Spst8g00365 665 SUPERFAMILY GST C-terminal domain-like 79 216 IPR036282 -
Spst8g00365 665 ProSiteProfiles NAC domain profile. 210 360 IPR003441 GO:0003677|GO:0006355
Spst8g00365 665 FunFam Glutathione S-transferase U20 90 221 - -
Spst8g00365 665 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 210 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00365 Spst-Chr8 3534416 3542321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00365 231 613 NAC Transcription Factor Family AT1G65910 51.414 3.56e-111 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Spst8g00365 NAM 9.9e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00365 - - gmx:100792628 678.707