Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00356 ATGTCGCTTCTCTGCTCCACCTTTGTCTCCTCAGCGCTCTTTATTTTTTCTTTCTTCAATTTCGTAACCGCTGCCACCGAGTTCGACTTTGGAACTTTAACATTGGGTAGCCTCAAGCTTCTCGGCGACGCTCACTTGAACAACGGCACCGTCAGCCTCACGCGCGACCTCGCCGTTCCCACCTCCAGTGCTGGCAGAGCTCTTTACTCCCGTCCGGTCAGGTTCCGCCAACCCGGAAGCCGCTCTCCGGCGAGCTTCACCACCTTCTTTTCCTTCTCTGTTGCCAATCTCAACCCTTCCTCCATCGGCGGCGGCCTCGCCTTCGTCCTCGCGCCGGACGACGAAACAATCGGCGACGCTGGTGGGTTTCTTGGACTTAGCGCAGCTGCCGCCTCCGCCGCCGATGGCGTCGGTGGCTTTATTGCCGTGGAGTTTGATACGCTCATGGACGTAGAGTTTAAGGACATTAATGGGAACCACGTTGGGGTGGACTTAAACAGTGTCGTTTCGAGCGAGGTTGGTGATTTGGCGAACATTGGGATCGACCTGAAGAGCGGTGACCTAATTAACGCGTGGATCGAGTTCGATGGATCGAGCAAAGGGTTAAGCGTGTGGGTTTCGTATTCCAATTTGAAACCGAAAGATCCCGTTTTGTCGATGAGTCTCGATGTGGATAAGTATTTGAATGATTTTATGTATGTGGGATTCTCAGGTTCCACGCAGGGTAGCACGGAGATTCACAGAATAGAATGGTGGAGTTTCGGTTCGTCTTTTGATGCTGCGGCGGCGGCGGCTCCGCCTCCTCCACCGGCGGTGAGTTTGATGAACCCGACGGCGAATTCGGTGAAGTCGGCGCCTCCTTCTTTGGCTCCTTCTAATAGTGAAGAGAAAGAGAGCAAAAGCAAATCGTCTTGCCACAATGGGTTGTGTAAGCAGAATTTGGGAGCGGTTGCTGGTGTTGTTACTGCTGGGGCATTTGTTTTGGCTCTTTTTGCTGGTGCATTGATTTGGTTTTACTCTAAGAAGGTTAAACGTGTTAGCAAGTTTGATTCGCTTGGTTCGGAGATCATTAAAATGCCGAAACAGTTTACCTACAAGGAGCTGAAGAATGCTACCAAGTGTTTCAATGCGAATAGGATCATTGGTCATGGCGCGTTTGGGACTGTGTATAAGGGGGTTTTGCCTGAGAATGGGGAAACTGTTGCGGTGAAGAGGTGCAGCCATAGTAGTCAGGGGAAGAATGAGTTTTTGTCTGAGTTGTCTATCATTGGGAGCCTTAGGCATCGGAATCTTGTTCGGCTGCAAGGGTGGTGCCATGAAAAAGGTGAGATTCTGCTGGTGTATGACTTGATGCCGAATGGGAGTTTGGATAAGGCTTTGTTTGAGGCAAGGACACCACTTCCCTGGTCTCACCGGCGCAAGATTTTGTTGGGCGTCGCCTCGGCCTTGGCCTACTTGCATCAAGAGTGTGAGAATCAGGTGATTCATAGGGACATCAAGACTAGTAATATAATGTTGGATGAAGGGTTCAGTGCCAGGTTGGGAGATTTTGGTTTGGCGAGGCAAACTGAGCATGACAAGTCGCCGGATGCCACCGTGGCTGCTGGGACAATGGGGTACTTGGCACCTGAGTATCTCCTTACGGGAAAGGCTACAGAGAAAACTGATGTGTTTAGTTATGGTGCAGTGGTTCTTGAGGTGGCCAGTGGGAGAAGACCGATAGAGAAGGATGCCAACGGGGGTGCTAAAGGTGGAATTACCTGCAATTTGGTAGAGTGGGTATGGAGTTTGCACCGGGAAGGCAGGTTGCTAATGGCGGCTGATGCAAGGCTTGAGGGCGAGTTTGATGAGGGGGAGATGAGGAGGTTGCTCTTGGTTGGGCTAGCTTGCTCTCACCCCGATCCACTGGCTAGACCTACTATGAGGGCTGTGGTTCAGATGCTGGTGGGGGAAGCTGATGTGCCTATTGTCCCAAGAACCAAGCCTTCCACAGGTTTTAGTACTTCCCACTCTTACTTACTAATGAGCTTGCAAGATAGTGTATCTGACTGTGATTATAATCACCATCTCTACTTCCACATCAGAGAACAGCTTCAATCTTGGAGATATACTCTGATTTTATGGAAATCTTTGGCTGGGACCAGACCATTTTTAATTATTGACTGA 2166 0.5042 MSLLCSTFVSSALFIFSFFNFVTAATEFDFGTLTLGSLKLLGDAHLNNGTVSLTRDLAVPTSSAGRALYSRPVRFRQPGSRSPASFTTFFSFSVANLNPSSIGGGLAFVLAPDDETIGDAGGFLGLSAAAASAADGVGGFIAVEFDTLMDVEFKDINGNHVGVDLNSVVSSEVGDLANIGIDLKSGDLINAWIEFDGSSKGLSVWVSYSNLKPKDPVLSMSLDVDKYLNDFMYVGFSGSTQGSTEIHRIEWWSFGSSFDAAAAAAPPPPPAVSLMNPTANSVKSAPPSLAPSNSEEKESKSKSSCHNGLCKQNLGAVAGVVTAGAFVLALFAGALIWFYSKKVKRVSKFDSLGSEIIKMPKQFTYKELKNATKCFNANRIIGHGAFGTVYKGVLPENGETVAVKRCSHSSQGKNEFLSELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWSHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFSARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGKATEKTDVFSYGAVVLEVASGRRPIEKDANGGAKGGITCNLVEWVWSLHREGRLLMAADARLEGEFDEGEMRRLLLVGLACSHPDPLARPTMRAVVQMLVGEADVPIVPRTKPSTGFSTSHSYLLMSLQDSVSDCDYNHHLYFHIREQLQSWRYTLILWKSLAGTRPFLIID 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00356 721 ProSitePatterns Legume lectins beta-chain signature. 141 147 IPR019825 -
Spst8g00356 721 PANTHER - 49 658 - -
Spst8g00356 721 Gene3D Transferase(Phosphotransferase) domain 1 451 654 - -
Spst8g00356 721 ProSiteProfiles Protein kinase domain profile. 375 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00356 721 Pfam Protein kinase domain 376 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00356 721 CDD lectin_legume_LecRK_Arcelin_ConA 14 258 IPR001220 GO:0030246
Spst8g00356 721 ProSitePatterns Protein kinases ATP-binding region signature. 381 404 IPR017441 GO:0005524
Spst8g00356 721 Gene3D Phosphorylase Kinase; domain 1 339 450 - -
Spst8g00356 721 CDD STKc_IRAK 381 648 - -
Spst8g00356 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672|GO:0006468
Spst8g00356 721 Gene3D - 23 266 - -
Spst8g00356 721 FunFam L-type lectin-domain containing receptor kinase VIII.1 24 267 - -
Spst8g00356 721 FunFam L-type lectin-domain containing receptor kinase VIII.1 451 666 - -
Spst8g00356 721 Pfam Legume lectin domain 27 263 IPR001220 GO:0030246
Spst8g00356 721 SMART serkin_6 375 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00356 721 MobiDBLite consensus disorder prediction 269 303 - -
Spst8g00356 721 MobiDBLite consensus disorder prediction 275 294 - -
Spst8g00356 721 FunFam L-type lectin-domain containing receptor kinase VIII.1 339 450 - -
Spst8g00356 721 SUPERFAMILY Protein kinase-like (PK-like) 357 675 IPR011009 -
Spst8g00356 721 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 263 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00356 Spst-Chr8 3422790 3424955 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00356 1 685 Receptor kinase-like Gene Family AT3G53380 68.966 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst8g00356 Pkinase 9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00356 - - gmx:100793157 1172.92