Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00325 ATGAAGTCTGCGCGGGTCAAAGGAGGGATTTTCTTTACTCTCCTAACGTGCGTCTTCGCCATTGCAGGTTCCGATCTAGCTTCAGACAGAGCGGGGCTGTTGATACTCCGAAGCGCGGTGGGGGGACGCACGCTGCTATGGAACACCACCCAAACGAGCCCTTGTTTGTGGACTGGCGTGGTCTGCACCAACGGGAGAGTGACCATGCTGCGCCTACCCGCGATGTGCCTTTCCGGTTCGCTCCCATCCGGTTTGGGCAACCTCACCGAACTGCAGACGCTATCCCTCCGGTTCAACGTGCTAACCGGACTAATCCCCGTGGATTTCGCCAACCTCAAAGCGCTGCGGAATCTATATCTCCAGGGAAACTTCTTCTCCGGCGAAGTTCCCGATGCGGTGTTCGCGTTGCAGAACCTTGTGAGGTTGAATTTAGGTAACAACAACTTCAGCGGCGAGATTTCTCCAAGGTTCAACGGTCTCACTCGTTTGGCCACTCTCTATCTCGAACGAAACAATTTCACCGGTTCAATCCCTGACCTTAGTGTTCCGCCTTTGGATCAGTTCAACGTTTCGTATAATTCCCTAACCGGTTCCATTCCGAACCGGTTTTCGCGTCTGGACCAAACCGCTTTTACCGGAAACTCACTCTGCGGGAAGCCCTTACAACTTTGCCCCGGAACCGAGGAGAAAAAGAATAAACTATCTGGTGGTGCCATTGCGGGTATTGTGATTGGTTCCGTGTTTGGTCTGTTGTTGATTCTGCTGCTTTTGTTCTTTTTGTGTAGAAAAAGGAGTGGGAAAAACGATGGAAGTGTGTCAACTGGGAAGCGTGATGCGGTGAGTGAAGTGTCTCGTGAAAAGAGTGTTGAGAGTGGTGGGAATTCAAGTTCGGCAGAGGCAGGTTCGGCGGAGAAGAGTGAGGTTCGAAGTAGTGGTAGTGGAGATAAGAGTTTGGTATTTTTTGGGAATGTGAATAGAGTGTTTAGTTTGGATGAGTTGTTGAGGGCTTCTGCGGAAGTGTTGGGGAAAGGAACGTTTGGAACGACTTATAAGGCGACTTTGGAGATGGGGACGAGTGTGGCGGTGAAGAGGTTGAAGGATGTTACTGCCACAGAGAGGGAATTCAGAGAGAAGATTGAGCAAGTGGGGAAGATGGTTCATCACAACTTGGTCCCACTAAGGGGTTATTACTTTAGCAGGGATGAGAAGCTTGTAGTCTATGATTACATGCCTATGGGAAGCTTATCTGCTCTCCTACATGGTAGTACCGCATCTTTCACGCTTGGTTGTTATTTTTGGACAATAGTGTCTCTCGTTTTTCTCTGTCTTGGTGCTATTTCTTTTGTTAAATCAGCAAATGGTGGGGTGGGGAGGACTCCACTGAATTGGGAAACAAGGTCTGCTATTGCCCTTGGTGCTGCTCGTGGGATTGCATGCATTCATTCGCATGGCCCAACGTCCTCTCATGGAAACATCAAGTCATCGAATATCCTTCTCACCAAATCTTTTGAAGCTCGTGTCTCCGACTTTGGCCTTGCTTACCTTGCTCTTCCAACCTCTACTCCAAACCGTGTTTCTGGTTACCGAGCGCCAGAGATCACTGATGCGCGCAAAGTATCCCAAAAAGCTGATGTCTATAGCTTTGGTATCATGCTTTTGGAGCTGCTTACTGGGAGGGCTCCTGCTCATTCTTCACTGAATGAAGAAGGGGTGGACCTCCCAAGATGGGTCCAATCCGTGGTTCAAGATGAGTGGAATACTGATGTATTTGACATGGAGCTTCTAAGGTACCAGAGTGTTGAGGAGGAAATGGTCAAGCTCTTGCAGCTTGCCCTTGACTGCACGGCCCAATATCCTGACAAGAGACCTTCAATGGATGTGGTGGCAAGCACGATTGAGGAAATTTGCCATACTAGTTTAGAGAAAGAGGAAGGGAAGAATCATGATTTTAAAGATGCTGATTATGGATTTTCCCAACAATACTACTCTGTTGACTCGGGTGTGTCACAAGCTTGA 2016 0.4881 MKSARVKGGIFFTLLTCVFAIAGSDLASDRAGLLILRSAVGGRTLLWNTTQTSPCLWTGVVCTNGRVTMLRLPAMCLSGSLPSGLGNLTELQTLSLRFNVLTGLIPVDFANLKALRNLYLQGNFFSGEVPDAVFALQNLVRLNLGNNNFSGEISPRFNGLTRLATLYLERNNFTGSIPDLSVPPLDQFNVSYNSLTGSIPNRFSRLDQTAFTGNSLCGKPLQLCPGTEEKKNKLSGGAIAGIVIGSVFGLLLILLLLFFLCRKRSGKNDGSVSTGKRDAVSEVSREKSVESGGNSSSAEAGSAEKSEVRSSGSGDKSLVFFGNVNRVFSLDELLRASAEVLGKGTFGTTYKATLEMGTSVAVKRLKDVTATEREFREKIEQVGKMVHHNLVPLRGYYFSRDEKLVVYDYMPMGSLSALLHGSTASFTLGCYFWTIVSLVFLCLGAISFVKSANGGVGRTPLNWETRSAIALGAARGIACIHSHGPTSSHGNIKSSNILLTKSFEARVSDFGLAYLALPTSTPNRVSGYRAPEITDARKVSQKADVYSFGIMLLELLTGRAPAHSSLNEEGVDLPRWVQSVVQDEWNTDVFDMELLRYQSVEEEMVKLLQLALDCTAQYPDKRPSMDVVASTIEEICHTSLEKEEGKNHDFKDADYGFSQQYYSVDSGVSQA 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00325 671 Gene3D Ribonuclease Inhibitor 36 134 IPR032675 -
Spst8g00325 671 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Spst8g00325 671 Gene3D Transferase(Phosphotransferase) domain 1 449 660 - -
Spst8g00325 671 SUPERFAMILY L domain-like 47 208 - -
Spst8g00325 671 MobiDBLite consensus disorder prediction 287 313 - -
Spst8g00325 671 Gene3D Phosphorylase Kinase; domain 1 301 409 - -
Spst8g00325 671 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 445 646 - -
Spst8g00325 671 FunFam pollen receptor-like kinase 1 303 409 - -
Spst8g00325 671 ProSiteProfiles Protein kinase domain profile. 335 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00325 671 PANTHER OS05G0588300 PROTEIN 11 639 - -
Spst8g00325 671 MobiDBLite consensus disorder prediction 266 313 - -
Spst8g00325 671 Pfam Protein tyrosine and serine/threonine kinase 339 630 IPR001245 GO:0004672|GO:0006468
Spst8g00325 671 Pfam Leucine rich repeat 86 123 IPR001611 GO:0005515
Spst8g00325 671 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Spst8g00325 671 Gene3D Ribonuclease Inhibitor 135 237 IPR032675 -
Spst8g00325 671 FunFam Probable inactive receptor kinase RLK902 26 181 - -
Spst8g00325 671 SUPERFAMILY Protein kinase-like (PK-like) 339 631 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00325 Spst-Chr8 2923498 2926182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00325 25 635 Receptor kinase-like Gene Family AT1G48480 55.194 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst8g00325 PK_Tyr_Ser-Thr 8.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00325 - - gmx:100801103 1018.45