Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00303 ATGAGCTTCTGTTCTGATCACACCAGGGGTGTTTCCAATGCACATGTTTCCCCTGCAGTAGGAAATGACTCTTTTGAGTACAGGAGGCACCAACTCATGACCTTTTTGAAAAAAACCATGTGGGACTTTGCCTTGGCATGTGTTGGTGTTGGTCCTTGTGGTTGCAACAACGAAGTGCATAACAAGGCGTGGCTACTGGAGGAGTCTGGAGCAGAATTGGCAAGTGCTGACCCTCAGTCGGTTCACTCATCTTTCAGGTTCAGCTTCTGCTCTCAGGTTGAGGTTGAGTCCTTCAACATGAGCTCTTCTGCTGCTGCTGCAACCTTTTTGATGGTGAATTTGGAATATGAGTCTCAAGTTACGGAGATGAAATGGAGGATACATTCACTGGAGAAAAGCATATCTCCAGTCGCCAACACTTTGATCAGGTTCAGCTATGATGAAATTCTATCAGCTACTCACAATTTCTCCAAAGAGAGAGTGTTGGGGAGAGGTGCCTTGAGCTGTGTTTTTAGAGGAAGAGTTGGGCTTTGGAGGACTGCTGTTGCTATTAAAAGGTTGGACAAGGAAGACAAGGAGTGTGCCAAGGCGTTTTGTAGAGAATTGATGATTGCTAATTCTCTTCATAACACAAATGTTGTTCCTCTTGTGGGGTTTTGTATTGACTCAGAAGAGGGTTTGTTTTTGGTATACAAGTATGTGTCAGGGGGCAGCCTAGAGCATCACTTGCATGGGAGGAAGAAAAGTGTAAAGGGTAGTTCATCACTTCCATGGTCTGTGAGATATAAAGTAGCAATTCGGATTGCAGAAGCCGTGGCTTATCTGCATAATGGAACAGAGAGATGTGTTGTTCATAGAGACATTAAGCCTTCAAACATTCTGCTCTCCTCTAAGAAGATTCCAAAGTTATGTGATTTTGGATTAGCTACATGGACTTCTGCCCCATCAGTTCCATTCCTTTGCAAAACTGTGAAAGGAACATTTGGTTATTTGGCTCCTGAGTATTTCCAACATGGGAGAGTATCAGATAAGACTGATGTTTACGCTTTAGGAGTTGTTTTATTGGAACTCTTAACTGGCCGTAAGCCAATTGAAGCGAAAAGACCCCCTGGAGAGGAAAACTTGGTAGTATGGGCAAAACCTTTGCTTAGGAAAGGGAAAGGAGCCATTGAAGACTTGCTTGATCCTCAAGTCAAGTACAATTCGAGCTACACAGATCAAATGGCTCGGATGGTCGATGCAGCAGCTGCCTGTGTTACAAATGAAGAATCTAGGAGGCCTAGCATAGGTGAGATTGTTGCAATACTGAAAGGTGAAGTTGAGCCTGTGTTGTCTAGAAGAAGGAAGTCTGGTTATCTTGGTAATGGATTTCTGATTGATTATTACCCTCAGTTACAACAAACAAATAATGAGATGAAAAGTCACCTGGCCTTGGCAATGCTAGGAGTTCCAGAGTGTGAGGATGAGGATTTTCTCTATGATCGTTGA 1488 0.4348 MSFCSDHTRGVSNAHVSPAVGNDSFEYRRHQLMTFLKKTMWDFALACVGVGPCGCNNEVHNKAWLLEESGAELASADPQSVHSSFRFSFCSQVEVESFNMSSSAAAATFLMVNLEYESQVTEMKWRIHSLEKSISPVANTLIRFSYDEILSATHNFSKERVLGRGALSCVFRGRVGLWRTAVAIKRLDKEDKECAKAFCRELMIANSLHNTNVVPLVGFCIDSEEGLFLVYKYVSGGSLEHHLHGRKKSVKGSSSLPWSVRYKVAIRIAEAVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGRVSDKTDVYALGVVLLELLTGRKPIEAKRPPGEENLVVWAKPLLRKGKGAIEDLLDPQVKYNSSYTDQMARMVDAAAACVTNEESRRPSIGEIVAILKGEVEPVLSRRRKSGYLGNGFLIDYYPQLQQTNNEMKSHLALAMLGVPECEDEDFLYDR 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00303 495 FunFam Putative receptor-like serine/threonine-protein kinase 234 451 - -
Spst8g00303 495 Gene3D Phosphorylase Kinase; domain 1 141 233 - -
Spst8g00303 495 Gene3D Transferase(Phosphotransferase) domain 1 234 447 - -
Spst8g00303 495 PANTHER OS01G0750732 PROTEIN 118 441 - -
Spst8g00303 495 Pfam Protein kinase domain 156 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00303 495 SUPERFAMILY Protein kinase-like (PK-like) 136 437 IPR011009 -
Spst8g00303 495 ProSiteProfiles Protein kinase domain profile. 156 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00303 495 FunFam probable serine/threonine-protein kinase PBL7 118 233 - -
Spst8g00303 495 SMART serkin_6 156 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00303 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 283 295 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00303 Spst-Chr8 2679044 2681281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00303 144 439 Trihelix Transcription Factor Family AT1G70460 40.268 4.71e-67 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Spst8g00303 Pkinase 5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00303 - - gmx:100820245 854.744