Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst8g00299 | ATGGAGGAGGCTGCTCCGGAGGAGGCGCTGGCCGTACGGCGAGCGTTGGAGATGCTCCAGATAAACGACCCCGTGTTGAGGGTCCAAGCGGCCAGGGAAATCCGCCGCCTCACCAAAACCTCCCACCGCTGCCGCCGCCACCTCCGCCAGGCCATCGCGCCACTAGTCTCCATGCTCCGAGTCAACTCGCCCGAGTTCCACGAACCCGCGCTTCTCGCTCTCCTCAACCTCGCCGTACAAGACGAAAAGAACAAAATTAAGATTGTGGAAGCTGGTGCATTAGAGCCAATGATCAGTTTCCTCAAGTCACAAAATCCAAATCTGCAGGAGTATGCAACTGCATCTTTGCTCACTCTATCTGCCTCTCCAACCAACAAACCAATCATTAGTGCTTGTGGCGCCATCCCTCTCCTTGTAAATACTCTTAGGGATGGAAGCTCCCAAGCTAAAGTTGATGCTGTGATGGCTCTGTCCAATTTATCAACACACCCTGATAACCTCAGCATCATTCTCGAAACAAATGCAATGCCTTTTATAGTTAGTCTTCTCAAAACCTGTAGAAAATCCTCAAAAATAGCTGAAAAATGTTCTGCTCTGATAGAATCCTTGGTGGGTTATGAGGAGGGCAGAACTGCCTTAACATCTGAAGAAGGTGGGGTTCTTGCAGTTGTGGAAGTTCTTGAAAATGGCACTCCCCTGAGTAGGGAACATGCTGTTGGAGCACTACTGACAATGTGCCAAAGTGATAGATGTAAATACAGGGAACCAATTCTTAGAGAAGGTGTTATTCCAGGACTTCTTGAGCTTACAGTTCAAGGAACCCCTAAATCTCAGCCAAAAGCACGTACCCTTTTGCAGTTACTGAGAGAGTCTCCATATTCAAGACCTGAAGTTGAACCTGACACTCTTGAGAACATAGTGTGTGACATCATATCTCAGATTGATGGAGATGATCAATCTGGTAAAGCAAAGAAGATGCTGGCTGAGATGGTCCAAGTCAGCATGGAGCAGAGTTTGAGACATTTGCAACAAAGGGCTCTTGTATGTACTCCTAGTGATATGCCTATTACAAGTTGTACTTCTGAAGTTTCTTCAAAATAG | 1101 | 0.4723 | MEEAAPEEALAVRRALEMLQINDPVLRVQAAREIRRLTKTSHRCRRHLRQAIAPLVSMLRVNSPEFHEPALLALLNLAVQDEKNKIKIVEAGALEPMISFLKSQNPNLQEYATASLLTLSASPTNKPIISACGAIPLLVNTLRDGSSQAKVDAVMALSNLSTHPDNLSIILETNAMPFIVSLLKTCRKSSKIAEKCSALIESLVGYEEGRTALTSEEGGVLAVVEVLENGTPLSREHAVGALLTMCQSDRCKYREPILREGVIPGLLELTVQGTPKSQPKARTLLQLLRESPYSRPEVEPDTLENIVCDIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPSDMPITSCTSEVSSK | 366 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst8g00299 | 366 | Pfam | Armadillo/beta-catenin-like repeat | 82 | 120 | IPR000225 | GO:0005515 | |
Spst8g00299 | 366 | SUPERFAMILY | ARM repeat | 14 | 300 | IPR016024 | - | |
Spst8g00299 | 366 | Gene3D | - | 1 | 348 | IPR011989 | - | |
Spst8g00299 | 366 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 92 | 134 | IPR000225 | GO:0005515 | |
Spst8g00299 | 366 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 174 | 218 | IPR000225 | GO:0005515 | |
Spst8g00299 | 366 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 133 | 175 | IPR000225 | GO:0005515 | |
Spst8g00299 | 366 | SMART | arm_5 | 122 | 162 | IPR000225 | GO:0005515 | |
Spst8g00299 | 366 | SMART | arm_5 | 163 | 205 | IPR000225 | GO:0005515 | |
Spst8g00299 | 366 | SMART | arm_5 | 81 | 121 | IPR000225 | GO:0005515 | |
Spst8g00299 | 366 | SMART | arm_5 | 40 | 79 | IPR000225 | GO:0005515 | |
Spst8g00299 | 366 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 50 | 92 | IPR000225 | GO:0005515 | |
Spst8g00299 | 366 | PANTHER | U BOX DOMAIN-CONTAINING | 12 | 291 | - | - | |
Spst8g00299 | 366 | FunFam | U-box domain-containing protein 4 | 1 | 348 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst8g00299 | Spst-Chr8 | 2639484 | 2642889 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst8g00299 | 12 | 289 | U-box Gene Family | AT2G23140 | 33.929 | 1.06e-36 | 138 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst8g00299 | - | - | gmx:100793971 | 619.772 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst8g00299 | 8 | 2639484 | 2642889 | Spst8g00299 | 8 | 2639484 | 2642889 | ECH | |
Spst8g00299 | 8 | 2639484 | 2642889 | Spst1g02240 | 1 | 30859671 | 30863235 | PCT |